Protein–RNA interactions for Protein: P61204

ARF3, ADP-ribosylation factor 3, humanhuman

Predicted RBP Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARF3P61204 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
ARF3P61204 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
ARF3P61204 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
ARF3P61204 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ARF3P61204 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ARF3P61204 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ARF3P61204 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
ARF3P61204 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ARF3P61204 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.82■□□□□ 0.44
ARF3P61204 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.82■□□□□ 0.44
ARF3P61204 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ARF3P61204 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
ARF3P61204 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
ARF3P61204 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
ARF3P61204 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.82■□□□□ 0.44
ARF3P61204 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ARF3P61204 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.82■□□□□ 0.44
ARF3P61204 AL049597.2-201ENST00000565575 961 ntBASIC17.82■□□□□ 0.44
ARF3P61204 AL441883.1-201ENST00000566170 1045 ntBASIC17.82■□□□□ 0.44
ARF3P61204 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ARF3P61204 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
ARF3P61204 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
ARF3P61204 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ARF3P61204 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
ARF3P61204 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
ARF3P61204 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ARF3P61204 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ARF3P61204 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ARF3P61204 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ARF3P61204 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ARF3P61204 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.81■□□□□ 0.44
ARF3P61204 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
ARF3P61204 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ARF3P61204 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.81■□□□□ 0.44
ARF3P61204 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ARF3P61204 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
ARF3P61204 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ARF3P61204 RNF152P1-201ENST00000397754 604 ntBASIC17.81■□□□□ 0.44
ARF3P61204 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ARF3P61204 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ARF3P61204 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.81■□□□□ 0.44
ARF3P61204 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
ARF3P61204 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ARF3P61204 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ARF3P61204 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
ARF3P61204 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.81■□□□□ 0.44
ARF3P61204 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
ARF3P61204 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ARF3P61204 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ARF3P61204 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
ARF3P61204 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.81■□□□□ 0.44
ARF3P61204 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ARF3P61204 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ARF3P61204 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ARF3P61204 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.8■□□□□ 0.44
ARF3P61204 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ARF3P61204 AP000974.1-201ENST00000623909 2387 ntBASIC17.8■□□□□ 0.44
ARF3P61204 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
ARF3P61204 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ARF3P61204 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
ARF3P61204 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.8■□□□□ 0.44
ARF3P61204 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ARF3P61204 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ARF3P61204 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
ARF3P61204 MIR1224-201ENST00000408193 85 ntBASIC17.8■□□□□ 0.44
ARF3P61204 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.8■□□□□ 0.44
ARF3P61204 TSPY5P-201ENST00000426936 936 ntBASIC17.8■□□□□ 0.44
ARF3P61204 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.8■□□□□ 0.44
ARF3P61204 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ARF3P61204 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.8■□□□□ 0.44
ARF3P61204 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.8■□□□□ 0.44
ARF3P61204 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.8■□□□□ 0.44
ARF3P61204 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ARF3P61204 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.8■□□□□ 0.44
ARF3P61204 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.8■□□□□ 0.44
ARF3P61204 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.8■□□□□ 0.44
ARF3P61204 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ARF3P61204 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ARF3P61204 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
ARF3P61204 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ARF3P61204 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ARF3P61204 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.8■□□□□ 0.44
ARF3P61204 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.8■□□□□ 0.44
ARF3P61204 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.8■□□□□ 0.44
ARF3P61204 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ARF3P61204 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
ARF3P61204 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ARF3P61204 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.79■□□□□ 0.44
ARF3P61204 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ARF3P61204 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ARF3P61204 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.79■□□□□ 0.44
ARF3P61204 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ARF3P61204 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.79■□□□□ 0.44
ARF3P61204 Z98044.1-201ENST00000632503 1764 ntBASIC17.79■□□□□ 0.44
ARF3P61204 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.79■□□□□ 0.44
ARF3P61204 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ARF3P61204 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ARF3P61204 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ARF3P61204 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.79■□□□□ 0.44
ARF3P61204 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms