Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ERVFC1P60507 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ERVFC1P60507 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ERVFC1P60507 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
ERVFC1P60507 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ERVFC1P60507 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ERVFC1P60507 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ERVFC1P60507 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ERVFC1P60507 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ERVFC1P60507 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ERVFC1P60507 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ERVFC1P60507 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ERVFC1P60507 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.64■□□□□ 0.73
ERVFC1P60507 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.64■□□□□ 0.73
ERVFC1P60507 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.64■□□□□ 0.73
ERVFC1P60507 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ERVFC1P60507 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.64■□□□□ 0.73
ERVFC1P60507 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.64■□□□□ 0.73
ERVFC1P60507 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.64■□□□□ 0.73
ERVFC1P60507 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ERVFC1P60507 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.64■□□□□ 0.73
ERVFC1P60507 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.64■□□□□ 0.73
ERVFC1P60507 TP73-AS1-207ENST00000624167 988 ntBASIC19.64■□□□□ 0.73
ERVFC1P60507 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.64■□□□□ 0.73
ERVFC1P60507 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.64■□□□□ 0.73
ERVFC1P60507 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.64■□□□□ 0.73
ERVFC1P60507 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ERVFC1P60507 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.64■□□□□ 0.73
ERVFC1P60507 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.64■□□□□ 0.73
ERVFC1P60507 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.64■□□□□ 0.73
ERVFC1P60507 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
ERVFC1P60507 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.64■□□□□ 0.73
ERVFC1P60507 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
ERVFC1P60507 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ERVFC1P60507 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ERVFC1P60507 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
ERVFC1P60507 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.63■□□□□ 0.73
ERVFC1P60507 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
ERVFC1P60507 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERVFC1P60507 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
ERVFC1P60507 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.63■□□□□ 0.73
ERVFC1P60507 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERVFC1P60507 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERVFC1P60507 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERVFC1P60507 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERVFC1P60507 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERVFC1P60507 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
ERVFC1P60507 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERVFC1P60507 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
ERVFC1P60507 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
ERVFC1P60507 RNA5SP419-201ENST00000515908 135 ntBASIC19.63■□□□□ 0.73
ERVFC1P60507 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.63■□□□□ 0.73
ERVFC1P60507 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.63■□□□□ 0.73
ERVFC1P60507 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.63■□□□□ 0.73
ERVFC1P60507 AF228730.7-201ENST00000641842 219 ntBASIC19.63■□□□□ 0.73
ERVFC1P60507 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
ERVFC1P60507 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERVFC1P60507 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERVFC1P60507 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERVFC1P60507 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERVFC1P60507 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERVFC1P60507 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.63■□□□□ 0.73
ERVFC1P60507 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ERVFC1P60507 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.62■□□□□ 0.73
ERVFC1P60507 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.62■□□□□ 0.73
ERVFC1P60507 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.62■□□□□ 0.73
ERVFC1P60507 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
ERVFC1P60507 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ERVFC1P60507 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
ERVFC1P60507 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
ERVFC1P60507 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ERVFC1P60507 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
ERVFC1P60507 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ERVFC1P60507 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ERVFC1P60507 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.62■□□□□ 0.73
ERVFC1P60507 VENTXP7-201ENST00000475503 772 ntBASIC19.62■□□□□ 0.73
ERVFC1P60507 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC19.62■□□□□ 0.73
ERVFC1P60507 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.62■□□□□ 0.73
ERVFC1P60507 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.62■□□□□ 0.73
ERVFC1P60507 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ERVFC1P60507 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ERVFC1P60507 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ERVFC1P60507 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ERVFC1P60507 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.62■□□□□ 0.73
ERVFC1P60507 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ERVFC1P60507 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ERVFC1P60507 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
ERVFC1P60507 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ERVFC1P60507 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
ERVFC1P60507 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.61■□□□□ 0.73
ERVFC1P60507 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ERVFC1P60507 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ERVFC1P60507 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ERVFC1P60507 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ERVFC1P60507 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ERVFC1P60507 AP000593.1-201ENST00000393668 712 ntBASIC19.61■□□□□ 0.73
ERVFC1P60507 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.61■□□□□ 0.73
ERVFC1P60507 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.61■□□□□ 0.73
ERVFC1P60507 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
ERVFC1P60507 AC068587.9-201ENST00000641814 219 ntBASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms