Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
COPAP53621 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.26■□□□□ 0.67
COPAP53621 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COPAP53621 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
COPAP53621 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
COPAP53621 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.25■□□□□ 0.67
COPAP53621 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
COPAP53621 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
COPAP53621 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COPAP53621 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
COPAP53621 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
COPAP53621 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COPAP53621 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COPAP53621 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
COPAP53621 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COPAP53621 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.25■□□□□ 0.67
COPAP53621 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.25■□□□□ 0.67
COPAP53621 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COPAP53621 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.25■□□□□ 0.67
COPAP53621 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.25■□□□□ 0.67
COPAP53621 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.25■□□□□ 0.67
COPAP53621 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COPAP53621 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.25■□□□□ 0.67
COPAP53621 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COPAP53621 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COPAP53621 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COPAP53621 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
COPAP53621 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
COPAP53621 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
COPAP53621 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
COPAP53621 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
COPAP53621 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
COPAP53621 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COPAP53621 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
COPAP53621 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COPAP53621 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COPAP53621 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.24■□□□□ 0.67
COPAP53621 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COPAP53621 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
COPAP53621 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.24■□□□□ 0.67
COPAP53621 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.24■□□□□ 0.67
COPAP53621 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COPAP53621 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COPAP53621 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.24■□□□□ 0.67
COPAP53621 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.24■□□□□ 0.67
COPAP53621 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COPAP53621 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.24■□□□□ 0.67
COPAP53621 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
COPAP53621 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.24■□□□□ 0.67
COPAP53621 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COPAP53621 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
COPAP53621 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
COPAP53621 AC005082.1-201ENST00000413042 2259 ntBASIC19.24■□□□□ 0.67
COPAP53621 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COPAP53621 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COPAP53621 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
COPAP53621 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
COPAP53621 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
COPAP53621 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COPAP53621 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
COPAP53621 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.24■□□□□ 0.67
COPAP53621 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COPAP53621 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COPAP53621 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
COPAP53621 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.23■□□□□ 0.67
COPAP53621 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
COPAP53621 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPAP53621 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COPAP53621 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
COPAP53621 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COPAP53621 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.23■□□□□ 0.67
COPAP53621 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPAP53621 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.23■□□□□ 0.67
COPAP53621 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.23■□□□□ 0.67
COPAP53621 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPAP53621 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPAP53621 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPAP53621 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.23■□□□□ 0.67
COPAP53621 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.23■□□□□ 0.67
COPAP53621 HOMER2P1-201ENST00000455653 964 ntBASIC19.23■□□□□ 0.67
COPAP53621 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.23■□□□□ 0.67
COPAP53621 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.23■□□□□ 0.67
COPAP53621 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.23■□□□□ 0.67
COPAP53621 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.23■□□□□ 0.67
COPAP53621 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COPAP53621 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.23■□□□□ 0.67
COPAP53621 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.23■□□□□ 0.67
COPAP53621 AC091076.1-201ENST00000610741 619 ntBASIC19.23■□□□□ 0.67
COPAP53621 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPAP53621 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPAP53621 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPAP53621 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPAP53621 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPAP53621 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPAP53621 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPAP53621 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.23■□□□□ 0.67
COPAP53621 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.23■□□□□ 0.67
COPAP53621 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COPAP53621 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPAP53621 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms