Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CX3CR1P49238 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.44■□□□□ 0.22
CX3CR1P49238 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.44■□□□□ 0.22
CX3CR1P49238 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CX3CR1P49238 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.43■□□□□ 0.22
CX3CR1P49238 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CX3CR1P49238 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.43■□□□□ 0.22
CX3CR1P49238 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CX3CR1P49238 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CX3CR1P49238 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
CX3CR1P49238 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CX3CR1P49238 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CX3CR1P49238 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CX3CR1P49238 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.43■□□□□ 0.22
CX3CR1P49238 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CX3CR1P49238 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CX3CR1P49238 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CX3CR1P49238 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CX3CR1P49238 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CX3CR1P49238 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CX3CR1P49238 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.43■□□□□ 0.22
CX3CR1P49238 FAM207BP-201ENST00000447172 505 ntBASIC16.43■□□□□ 0.22
CX3CR1P49238 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.43■□□□□ 0.22
CX3CR1P49238 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CX3CR1P49238 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.43■□□□□ 0.22
CX3CR1P49238 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CX3CR1P49238 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.43■□□□□ 0.22
CX3CR1P49238 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CX3CR1P49238 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CX3CR1P49238 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CX3CR1P49238 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.43■□□□□ 0.22
CX3CR1P49238 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CX3CR1P49238 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.43■□□□□ 0.22
CX3CR1P49238 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CX3CR1P49238 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.43■□□□□ 0.22
CX3CR1P49238 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.43■□□□□ 0.22
CX3CR1P49238 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CX3CR1P49238 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CX3CR1P49238 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CX3CR1P49238 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CX3CR1P49238 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CX3CR1P49238 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.43■□□□□ 0.22
CX3CR1P49238 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
CX3CR1P49238 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.43■□□□□ 0.22
CX3CR1P49238 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.43■□□□□ 0.22
CX3CR1P49238 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CX3CR1P49238 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CX3CR1P49238 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CX3CR1P49238 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CX3CR1P49238 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.42■□□□□ 0.22
CX3CR1P49238 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CX3CR1P49238 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CX3CR1P49238 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CX3CR1P49238 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.42■□□□□ 0.22
CX3CR1P49238 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.42■□□□□ 0.22
CX3CR1P49238 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CX3CR1P49238 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CX3CR1P49238 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.42■□□□□ 0.22
CX3CR1P49238 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CX3CR1P49238 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CX3CR1P49238 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
CX3CR1P49238 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CX3CR1P49238 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC16.42■□□□□ 0.22
CX3CR1P49238 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC16.42■□□□□ 0.22
CX3CR1P49238 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC16.42■□□□□ 0.22
CX3CR1P49238 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CX3CR1P49238 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.42■□□□□ 0.22
CX3CR1P49238 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.42■□□□□ 0.22
CX3CR1P49238 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.42■□□□□ 0.22
CX3CR1P49238 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CX3CR1P49238 KRT8P3-201ENST00000519669 1449 ntBASIC16.42■□□□□ 0.22
CX3CR1P49238 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CX3CR1P49238 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CX3CR1P49238 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.42■□□□□ 0.22
CX3CR1P49238 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CX3CR1P49238 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.42■□□□□ 0.22
CX3CR1P49238 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CX3CR1P49238 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.41■□□□□ 0.22
CX3CR1P49238 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CX3CR1P49238 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CX3CR1P49238 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.41■□□□□ 0.22
CX3CR1P49238 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CX3CR1P49238 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CX3CR1P49238 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CX3CR1P49238 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CX3CR1P49238 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CX3CR1P49238 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
CX3CR1P49238 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CX3CR1P49238 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CX3CR1P49238 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CX3CR1P49238 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.41■□□□□ 0.22
CX3CR1P49238 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CX3CR1P49238 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CX3CR1P49238 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CX3CR1P49238 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.41■□□□□ 0.22
CX3CR1P49238 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CX3CR1P49238 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CX3CR1P49238 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.41■□□□□ 0.22
CX3CR1P49238 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.41■□□□□ 0.22
CX3CR1P49238 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms