Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AL512353.2-201ENST00000448759 1962 ntBASIC17.74■□□□□ 0.43
RORAP35398 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
RORAP35398 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
RORAP35398 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.74■□□□□ 0.43
RORAP35398 AC034232.1-201ENST00000506026 1064 ntBASIC17.74■□□□□ 0.43
RORAP35398 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RORAP35398 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.74■□□□□ 0.43
RORAP35398 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.74■□□□□ 0.43
RORAP35398 AC024243.1-201ENST00000609234 778 ntBASIC17.74■□□□□ 0.43
RORAP35398 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RORAP35398 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RORAP35398 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.74■□□□□ 0.43
RORAP35398 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RORAP35398 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RORAP35398 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RORAP35398 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RORAP35398 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.74■□□□□ 0.43
RORAP35398 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.73■□□□□ 0.43
RORAP35398 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RORAP35398 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.73■□□□□ 0.43
RORAP35398 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.73■□□□□ 0.43
RORAP35398 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RORAP35398 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RORAP35398 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RORAP35398 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RORAP35398 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RORAP35398 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RORAP35398 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RORAP35398 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.73■□□□□ 0.43
RORAP35398 SPDYE13P-201ENST00000445314 798 ntBASIC17.73■□□□□ 0.43
RORAP35398 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RORAP35398 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.73■□□□□ 0.43
RORAP35398 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
RORAP35398 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.73■□□□□ 0.43
RORAP35398 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.73■□□□□ 0.43
RORAP35398 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.73■□□□□ 0.43
RORAP35398 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.73■□□□□ 0.43
RORAP35398 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.73■□□□□ 0.43
RORAP35398 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RORAP35398 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RORAP35398 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.72■□□□□ 0.43
RORAP35398 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RORAP35398 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.72■□□□□ 0.43
RORAP35398 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RORAP35398 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RORAP35398 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RORAP35398 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
RORAP35398 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RORAP35398 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RORAP35398 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.72■□□□□ 0.43
RORAP35398 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.72■□□□□ 0.43
RORAP35398 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RORAP35398 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.72■□□□□ 0.43
RORAP35398 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
RORAP35398 HBZP1-201ENST00000354915 429 ntBASIC17.72■□□□□ 0.43
RORAP35398 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RORAP35398 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RORAP35398 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RORAP35398 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RORAP35398 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RORAP35398 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RORAP35398 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.72■□□□□ 0.43
RORAP35398 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RORAP35398 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RORAP35398 SEC1P-202ENST00000473944 940 ntBASIC17.72■□□□□ 0.43
RORAP35398 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.72■□□□□ 0.43
RORAP35398 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RORAP35398 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
RORAP35398 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
RORAP35398 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RORAP35398 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.72■□□□□ 0.43
RORAP35398 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RORAP35398 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.72■□□□□ 0.43
RORAP35398 RCC2P3-201ENST00000418112 1537 ntBASIC17.72■□□□□ 0.43
RORAP35398 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.72■□□□□ 0.43
RORAP35398 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RORAP35398 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.72■□□□□ 0.43
RORAP35398 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
RORAP35398 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RORAP35398 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RORAP35398 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.71■□□□□ 0.43
RORAP35398 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.71■□□□□ 0.43
RORAP35398 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
RORAP35398 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RORAP35398 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RORAP35398 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RORAP35398 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RORAP35398 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.71■□□□□ 0.43
RORAP35398 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
RORAP35398 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RORAP35398 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RORAP35398 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.71■□□□□ 0.43
RORAP35398 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RORAP35398 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
RORAP35398 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.71■□□□□ 0.43
RORAP35398 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.71■□□□□ 0.43
RORAP35398 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.71■□□□□ 0.43
RORAP35398 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RORAP35398 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RORAP35398 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms