Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.42■□□□□ 0.54
HOXA6P31267 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.42■□□□□ 0.54
HOXA6P31267 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HOXA6P31267 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
HOXA6P31267 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HOXA6P31267 RPS2P28-201ENST00000314255 741 ntBASIC18.42■□□□□ 0.54
HOXA6P31267 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.42■□□□□ 0.54
HOXA6P31267 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HOXA6P31267 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
HOXA6P31267 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
HOXA6P31267 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.42■□□□□ 0.54
HOXA6P31267 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.42■□□□□ 0.54
HOXA6P31267 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HOXA6P31267 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
HOXA6P31267 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HOXA6P31267 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.42■□□□□ 0.54
HOXA6P31267 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HOXA6P31267 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HOXA6P31267 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.42■□□□□ 0.54
HOXA6P31267 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HOXA6P31267 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HOXA6P31267 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
HOXA6P31267 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HOXA6P31267 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
HOXA6P31267 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HOXA6P31267 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HOXA6P31267 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HOXA6P31267 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.41■□□□□ 0.54
HOXA6P31267 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.41■□□□□ 0.54
HOXA6P31267 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.41■□□□□ 0.54
HOXA6P31267 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.41■□□□□ 0.54
HOXA6P31267 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HOXA6P31267 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
HOXA6P31267 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HOXA6P31267 AC073648.2-201ENST00000510116 352 ntBASIC18.41■□□□□ 0.54
HOXA6P31267 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.41■□□□□ 0.54
HOXA6P31267 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.41■□□□□ 0.54
HOXA6P31267 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.41■□□□□ 0.54
HOXA6P31267 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.41■□□□□ 0.54
HOXA6P31267 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.41■□□□□ 0.54
HOXA6P31267 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.41■□□□□ 0.54
HOXA6P31267 AC008687.5-201ENST00000593746 558 ntBASIC18.41■□□□□ 0.54
HOXA6P31267 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.41■□□□□ 0.54
HOXA6P31267 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HOXA6P31267 FAM215A-202ENST00000632077 792 ntBASIC18.41■□□□□ 0.54
HOXA6P31267 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
HOXA6P31267 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HOXA6P31267 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HOXA6P31267 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HOXA6P31267 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
HOXA6P31267 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.4■□□□□ 0.54
HOXA6P31267 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HOXA6P31267 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.4■□□□□ 0.54
HOXA6P31267 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.4■□□□□ 0.54
HOXA6P31267 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
HOXA6P31267 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HOXA6P31267 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
HOXA6P31267 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HOXA6P31267 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.4■□□□□ 0.54
HOXA6P31267 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HOXA6P31267 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.4■□□□□ 0.54
HOXA6P31267 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HOXA6P31267 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
HOXA6P31267 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
HOXA6P31267 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.4■□□□□ 0.54
HOXA6P31267 AC113404.2-201ENST00000507884 177 ntBASIC18.4■□□□□ 0.54
HOXA6P31267 AC096582.2-201ENST00000510860 516 ntBASIC18.4■□□□□ 0.54
HOXA6P31267 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.4■□□□□ 0.54
HOXA6P31267 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.4■□□□□ 0.54
HOXA6P31267 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HOXA6P31267 MIR7706-201ENST00000613747 67 ntBASIC18.4■□□□□ 0.54
HOXA6P31267 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HOXA6P31267 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
HOXA6P31267 AC068587.9-201ENST00000641814 219 ntBASIC18.4■□□□□ 0.54
HOXA6P31267 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HOXA6P31267 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HOXA6P31267 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HOXA6P31267 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
HOXA6P31267 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.4■□□□□ 0.54
HOXA6P31267 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HOXA6P31267 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.4■□□□□ 0.54
HOXA6P31267 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HOXA6P31267 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HOXA6P31267 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HOXA6P31267 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.4■□□□□ 0.54
HOXA6P31267 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
HOXA6P31267 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.39■□□□□ 0.54
HOXA6P31267 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HOXA6P31267 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.39■□□□□ 0.54
HOXA6P31267 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.39■□□□□ 0.54
HOXA6P31267 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.39■□□□□ 0.54
HOXA6P31267 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HOXA6P31267 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.39■□□□□ 0.53
HOXA6P31267 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.39■□□□□ 0.53
HOXA6P31267 FGFR3P6-201ENST00000457012 610 ntBASIC18.39■□□□□ 0.53
HOXA6P31267 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.39■□□□□ 0.53
HOXA6P31267 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.39■□□□□ 0.53
HOXA6P31267 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
HOXA6P31267 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.39■□□□□ 0.53
HOXA6P31267 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms