Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.05■□□□□ 0.96
CTGFP29279 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.04■□□□□ 0.96
CTGFP29279 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CTGFP29279 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTGFP29279 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC21.04■□□□□ 0.96
CTGFP29279 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CTGFP29279 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTGFP29279 MED16-201ENST00000269814 1199 ntTSL 5 BASIC21.04■□□□□ 0.96
CTGFP29279 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CTGFP29279 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTGFP29279 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTGFP29279 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTGFP29279 THAP5-204ENST00000438865 868 ntTSL 2 BASIC21.04■□□□□ 0.96
CTGFP29279 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CTGFP29279 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC21.04■□□□□ 0.96
CTGFP29279 AC145285.3-201ENST00000564603 959 ntBASIC21.04■□□□□ 0.96
CTGFP29279 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC21.04■□□□□ 0.96
CTGFP29279 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC21.04■□□□□ 0.96
CTGFP29279 AC005336.2-201ENST00000593183 939 ntBASIC21.04■□□□□ 0.96
CTGFP29279 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC21.04■□□□□ 0.96
CTGFP29279 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CTGFP29279 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTGFP29279 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
CTGFP29279 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTGFP29279 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC21.04■□□□□ 0.96
CTGFP29279 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC21.04■□□□□ 0.96
CTGFP29279 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CTGFP29279 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC21.04■□□□□ 0.96
CTGFP29279 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC21.04■□□□□ 0.96
CTGFP29279 AC022898.2-201ENST00000616822 1312 ntBASIC21.04■□□□□ 0.96
CTGFP29279 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTGFP29279 AC112907.3-201ENST00000577781 2400 ntBASIC21.03■□□□□ 0.96
CTGFP29279 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTGFP29279 HIST2H3DP1-201ENST00000401004 416 ntBASIC21.03■□□□□ 0.96
CTGFP29279 SCARNA2-201ENST00000458748 420 ntBASIC21.03■□□□□ 0.96
CTGFP29279 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC21.03■□□□□ 0.96
CTGFP29279 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC21.03■□□□□ 0.96
CTGFP29279 AP001269.4-201ENST00000609611 512 ntBASIC21.03■□□□□ 0.96
CTGFP29279 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CTGFP29279 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CTGFP29279 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTGFP29279 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CTGFP29279 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.03■□□□□ 0.96
CTGFP29279 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.03■□□□□ 0.96
CTGFP29279 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CTGFP29279 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CTGFP29279 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTGFP29279 AC104109.2-201ENST00000602919 1418 ntBASIC21.03■□□□□ 0.96
CTGFP29279 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTGFP29279 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CTGFP29279 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTGFP29279 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CTGFP29279 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CTGFP29279 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CTGFP29279 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
CTGFP29279 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CTGFP29279 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CTGFP29279 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC21.02■□□□□ 0.96
CTGFP29279 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC21.02■□□□□ 0.96
CTGFP29279 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC21.02■□□□□ 0.96
CTGFP29279 MTDHP3-201ENST00000594186 672 ntBASIC21.02■□□□□ 0.96
CTGFP29279 AL356488.2-201ENST00000602755 427 ntBASIC21.02■□□□□ 0.96
CTGFP29279 AC140113.2-201ENST00000604370 208 ntBASIC21.02■□□□□ 0.96
CTGFP29279 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CTGFP29279 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.02■□□□□ 0.96
CTGFP29279 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.02■□□□□ 0.95
CTGFP29279 LINC01521-201ENST00000504184 1943 ntBASIC21.02■□□□□ 0.95
CTGFP29279 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CTGFP29279 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC21.01■□□□□ 0.95
CTGFP29279 AL357033.4-201ENST00000617703 1807 ntBASIC21.01■□□□□ 0.95
CTGFP29279 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC21.01■□□□□ 0.95
CTGFP29279 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CTGFP29279 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CTGFP29279 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CTGFP29279 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CTGFP29279 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.01■□□□□ 0.95
CTGFP29279 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CTGFP29279 CCS-201ENST00000310190 942 ntTSL 5 BASIC21.01■□□□□ 0.95
CTGFP29279 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CTGFP29279 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC21.01■□□□□ 0.95
CTGFP29279 RPSAP43-201ENST00000402237 625 ntBASIC21.01■□□□□ 0.95
CTGFP29279 UPF3AP3-201ENST00000420996 769 ntBASIC21.01■□□□□ 0.95
CTGFP29279 PMS2P2-201ENST00000425039 1128 ntBASIC21.01■□□□□ 0.95
CTGFP29279 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC21.01■□□□□ 0.95
CTGFP29279 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC21.01■□□□□ 0.95
CTGFP29279 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC21.01■□□□□ 0.95
CTGFP29279 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CTGFP29279 AC027796.2-201ENST00000575326 344 ntBASIC21.01■□□□□ 0.95
CTGFP29279 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC21.01■□□□□ 0.95
CTGFP29279 AC010327.4-202ENST00000591484 748 ntBASIC21.01■□□□□ 0.95
CTGFP29279 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CTGFP29279 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CTGFP29279 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CTGFP29279 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CTGFP29279 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CTGFP29279 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CTGFP29279 PAN3-AS1-201ENST00000563843 1351 ntBASIC21■□□□□ 0.95
CTGFP29279 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CTGFP29279 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21■□□□□ 0.95
CTGFP29279 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms