Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GDF1P27539 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.94■□□□□ 0.3
GDF1P27539 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.94■□□□□ 0.3
GDF1P27539 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
GDF1P27539 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GDF1P27539 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GDF1P27539 AL049812.1-201ENST00000432563 2267 ntBASIC16.94■□□□□ 0.3
GDF1P27539 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
GDF1P27539 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GDF1P27539 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
GDF1P27539 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
GDF1P27539 STARP1-201ENST00000397973 869 ntBASIC16.94■□□□□ 0.3
GDF1P27539 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GDF1P27539 KRT18P23-201ENST00000435622 1283 ntBASIC16.94■□□□□ 0.3
GDF1P27539 AC112907.2-201ENST00000448639 330 ntBASIC16.94■□□□□ 0.3
GDF1P27539 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.94■□□□□ 0.3
GDF1P27539 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
GDF1P27539 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GDF1P27539 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GDF1P27539 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
GDF1P27539 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.94■□□□□ 0.3
GDF1P27539 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
GDF1P27539 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GDF1P27539 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.94■□□□□ 0.3
GDF1P27539 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GDF1P27539 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GDF1P27539 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.94■□□□□ 0.3
GDF1P27539 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.94■□□□□ 0.3
GDF1P27539 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.93■□□□□ 0.3
GDF1P27539 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GDF1P27539 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
GDF1P27539 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GDF1P27539 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GDF1P27539 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
GDF1P27539 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GDF1P27539 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
GDF1P27539 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
GDF1P27539 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
GDF1P27539 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GDF1P27539 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GDF1P27539 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GDF1P27539 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GDF1P27539 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.93■□□□□ 0.3
GDF1P27539 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GDF1P27539 AL031133.1-201ENST00000406807 723 ntBASIC16.93■□□□□ 0.3
GDF1P27539 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GDF1P27539 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GDF1P27539 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
GDF1P27539 SPDYE15P-201ENST00000424157 909 ntBASIC16.93■□□□□ 0.3
GDF1P27539 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
GDF1P27539 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GDF1P27539 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
GDF1P27539 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GDF1P27539 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GDF1P27539 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.93■□□□□ 0.3
GDF1P27539 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GDF1P27539 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GDF1P27539 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.93■□□□□ 0.3
GDF1P27539 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GDF1P27539 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GDF1P27539 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.93■□□□□ 0.3
GDF1P27539 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
GDF1P27539 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.93■□□□□ 0.3
GDF1P27539 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
GDF1P27539 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
GDF1P27539 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.93■□□□□ 0.3
GDF1P27539 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.93■□□□□ 0.3
GDF1P27539 AC068587.9-201ENST00000641814 219 ntBASIC16.93■□□□□ 0.3
GDF1P27539 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GDF1P27539 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GDF1P27539 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GDF1P27539 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
GDF1P27539 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GDF1P27539 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GDF1P27539 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC16.93■□□□□ 0.3
GDF1P27539 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
GDF1P27539 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
GDF1P27539 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.92■□□□□ 0.3
GDF1P27539 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GDF1P27539 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GDF1P27539 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GDF1P27539 MIR564-202ENST00000385049 94 ntBASIC16.92■□□□□ 0.3
GDF1P27539 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
GDF1P27539 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
GDF1P27539 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.92■□□□□ 0.3
GDF1P27539 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.92■□□□□ 0.3
GDF1P27539 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
GDF1P27539 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GDF1P27539 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.92■□□□□ 0.3
GDF1P27539 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
GDF1P27539 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.92■□□□□ 0.3
GDF1P27539 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GDF1P27539 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
GDF1P27539 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.92■□□□□ 0.3
GDF1P27539 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
GDF1P27539 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.92■□□□□ 0.3
GDF1P27539 AC034236.2-201ENST00000606662 1610 ntBASIC16.92■□□□□ 0.3
GDF1P27539 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GDF1P27539 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.92■□□□□ 0.3
GDF1P27539 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms