Protein–RNA interactions for Protein: P0DJJ0

SRGAP2C, SLIT-ROBO Rho GTPase-activating protein 2C, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2CP0DJJ0 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SRGAP2CP0DJJ0 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.54■□□□□ 0.88
SRGAP2CP0DJJ0 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
SRGAP2CP0DJJ0 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.54■□□□□ 0.88
SRGAP2CP0DJJ0 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
SRGAP2CP0DJJ0 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SRGAP2CP0DJJ0 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SRGAP2CP0DJJ0 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SRGAP2CP0DJJ0 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SRGAP2CP0DJJ0 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
SRGAP2CP0DJJ0 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SRGAP2CP0DJJ0 HEIH-201ENST00000623091 1652 ntBASIC20.54■□□□□ 0.88
SRGAP2CP0DJJ0 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SRGAP2CP0DJJ0 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SRGAP2CP0DJJ0 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SRGAP2CP0DJJ0 AL357033.4-201ENST00000617703 1807 ntBASIC20.53■□□□□ 0.88
SRGAP2CP0DJJ0 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SRGAP2CP0DJJ0 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SRGAP2CP0DJJ0 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
SRGAP2CP0DJJ0 PCED1CP-201ENST00000419887 785 ntBASIC20.53■□□□□ 0.88
SRGAP2CP0DJJ0 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.53■□□□□ 0.88
SRGAP2CP0DJJ0 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.53■□□□□ 0.88
SRGAP2CP0DJJ0 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.53■□□□□ 0.88
SRGAP2CP0DJJ0 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.53■□□□□ 0.88
SRGAP2CP0DJJ0 AC091076.1-201ENST00000610741 619 ntBASIC20.53■□□□□ 0.88
SRGAP2CP0DJJ0 AL157888.1-201ENST00000631930 593 ntBASIC20.53■□□□□ 0.88
SRGAP2CP0DJJ0 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
SRGAP2CP0DJJ0 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SRGAP2CP0DJJ0 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SRGAP2CP0DJJ0 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SRGAP2CP0DJJ0 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
SRGAP2CP0DJJ0 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SRGAP2CP0DJJ0 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SRGAP2CP0DJJ0 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.53■□□□□ 0.88
SRGAP2CP0DJJ0 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SRGAP2CP0DJJ0 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SRGAP2CP0DJJ0 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SRGAP2CP0DJJ0 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SRGAP2CP0DJJ0 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SRGAP2CP0DJJ0 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SRGAP2CP0DJJ0 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SRGAP2CP0DJJ0 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
SRGAP2CP0DJJ0 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SRGAP2CP0DJJ0 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SRGAP2CP0DJJ0 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SRGAP2CP0DJJ0 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SRGAP2CP0DJJ0 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SRGAP2CP0DJJ0 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SRGAP2CP0DJJ0 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
SRGAP2CP0DJJ0 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SRGAP2CP0DJJ0 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SRGAP2CP0DJJ0 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.52■□□□□ 0.88
SRGAP2CP0DJJ0 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.52■□□□□ 0.88
SRGAP2CP0DJJ0 ZNF444P1-201ENST00000559497 298 ntBASIC20.52■□□□□ 0.88
SRGAP2CP0DJJ0 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SRGAP2CP0DJJ0 AC083849.1-201ENST00000615227 514 ntBASIC20.52■□□□□ 0.88
SRGAP2CP0DJJ0 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SRGAP2CP0DJJ0 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SRGAP2CP0DJJ0 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SRGAP2CP0DJJ0 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SRGAP2CP0DJJ0 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.52■□□□□ 0.88
SRGAP2CP0DJJ0 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SRGAP2CP0DJJ0 AC034236.2-201ENST00000606662 1610 ntBASIC20.52■□□□□ 0.88
SRGAP2CP0DJJ0 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SRGAP2CP0DJJ0 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
SRGAP2CP0DJJ0 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.52■□□□□ 0.87
SRGAP2CP0DJJ0 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
SRGAP2CP0DJJ0 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SRGAP2CP0DJJ0 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SRGAP2CP0DJJ0 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
SRGAP2CP0DJJ0 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SRGAP2CP0DJJ0 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SRGAP2CP0DJJ0 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.51■□□□□ 0.87
SRGAP2CP0DJJ0 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SRGAP2CP0DJJ0 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SRGAP2CP0DJJ0 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SRGAP2CP0DJJ0 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.51■□□□□ 0.87
SRGAP2CP0DJJ0 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SRGAP2CP0DJJ0 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SRGAP2CP0DJJ0 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SRGAP2CP0DJJ0 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SRGAP2CP0DJJ0 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SRGAP2CP0DJJ0 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SRGAP2CP0DJJ0 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.51■□□□□ 0.87
SRGAP2CP0DJJ0 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SRGAP2CP0DJJ0 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.51■□□□□ 0.87
SRGAP2CP0DJJ0 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.51■□□□□ 0.87
SRGAP2CP0DJJ0 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.51■□□□□ 0.87
SRGAP2CP0DJJ0 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.51■□□□□ 0.87
SRGAP2CP0DJJ0 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.51■□□□□ 0.87
SRGAP2CP0DJJ0 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.51■□□□□ 0.87
SRGAP2CP0DJJ0 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SRGAP2CP0DJJ0 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SRGAP2CP0DJJ0 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SRGAP2CP0DJJ0 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SRGAP2CP0DJJ0 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SRGAP2CP0DJJ0 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SRGAP2CP0DJJ0 AC005332.1-201ENST00000577698 1310 ntBASIC20.51■□□□□ 0.87
SRGAP2CP0DJJ0 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SRGAP2CP0DJJ0 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms