Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CAPNS1P04632 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CAPNS1P04632 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CAPNS1P04632 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CAPNS1P04632 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAPNS1P04632 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAPNS1P04632 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.59■□□□□ 0.57
CAPNS1P04632 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CAPNS1P04632 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.59■□□□□ 0.57
CAPNS1P04632 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAPNS1P04632 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CAPNS1P04632 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.59■□□□□ 0.57
CAPNS1P04632 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.59■□□□□ 0.57
CAPNS1P04632 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.59■□□□□ 0.57
CAPNS1P04632 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CAPNS1P04632 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CAPNS1P04632 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.59■□□□□ 0.57
CAPNS1P04632 MFAP1P1-201ENST00000442257 1255 ntBASIC18.59■□□□□ 0.57
CAPNS1P04632 VENTXP5-201ENST00000523979 775 ntBASIC18.59■□□□□ 0.57
CAPNS1P04632 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.59■□□□□ 0.57
CAPNS1P04632 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CAPNS1P04632 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CAPNS1P04632 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.59■□□□□ 0.57
CAPNS1P04632 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
CAPNS1P04632 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAPNS1P04632 AP000997.3-201ENST00000623333 2250 ntBASIC18.59■□□□□ 0.57
CAPNS1P04632 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CAPNS1P04632 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CAPNS1P04632 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAPNS1P04632 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAPNS1P04632 PTBP1P-201ENST00000554374 1601 ntBASIC18.59■□□□□ 0.57
CAPNS1P04632 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.59■□□□□ 0.57
CAPNS1P04632 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAPNS1P04632 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAPNS1P04632 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.59■□□□□ 0.57
CAPNS1P04632 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CAPNS1P04632 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CAPNS1P04632 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CAPNS1P04632 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CAPNS1P04632 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.57
CAPNS1P04632 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
CAPNS1P04632 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CAPNS1P04632 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CAPNS1P04632 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CAPNS1P04632 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.58■□□□□ 0.56
CAPNS1P04632 AL845331.1-201ENST00000424978 1190 ntBASIC18.58■□□□□ 0.56
CAPNS1P04632 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.58■□□□□ 0.56
CAPNS1P04632 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.58■□□□□ 0.56
CAPNS1P04632 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.58■□□□□ 0.56
CAPNS1P04632 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.58■□□□□ 0.56
CAPNS1P04632 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CAPNS1P04632 AC083849.1-201ENST00000615227 514 ntBASIC18.58■□□□□ 0.56
CAPNS1P04632 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CAPNS1P04632 HYMAI.1-201ENST00000620949 238 ntBASIC18.58■□□□□ 0.56
CAPNS1P04632 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CAPNS1P04632 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CAPNS1P04632 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CAPNS1P04632 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CAPNS1P04632 NOC2LP2-201ENST00000407594 1944 ntBASIC18.58■□□□□ 0.56
CAPNS1P04632 RCC2P6-201ENST00000526625 1557 ntBASIC18.58■□□□□ 0.56
CAPNS1P04632 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
CAPNS1P04632 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CAPNS1P04632 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CAPNS1P04632 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CAPNS1P04632 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.58■□□□□ 0.56
CAPNS1P04632 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CAPNS1P04632 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CAPNS1P04632 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CAPNS1P04632 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CAPNS1P04632 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CAPNS1P04632 PCDHB18P-201ENST00000524813 2368 ntBASIC18.57■□□□□ 0.56
CAPNS1P04632 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CAPNS1P04632 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.57■□□□□ 0.56
CAPNS1P04632 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CAPNS1P04632 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CAPNS1P04632 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CAPNS1P04632 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CAPNS1P04632 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CAPNS1P04632 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CAPNS1P04632 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CAPNS1P04632 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CAPNS1P04632 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.57■□□□□ 0.56
CAPNS1P04632 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.57■□□□□ 0.56
CAPNS1P04632 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CAPNS1P04632 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CAPNS1P04632 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CAPNS1P04632 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CAPNS1P04632 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.57■□□□□ 0.56
CAPNS1P04632 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CAPNS1P04632 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CAPNS1P04632 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CAPNS1P04632 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CAPNS1P04632 KRT8P45-201ENST00000414328 1447 ntBASIC18.57■□□□□ 0.56
CAPNS1P04632 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CAPNS1P04632 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CAPNS1P04632 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CAPNS1P04632 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CAPNS1P04632 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CAPNS1P04632 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CAPNS1P04632 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms