Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
HLA-DQA1P01909 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
HLA-DQA1P01909 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
HLA-DQA1P01909 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC14.06□□□□□ -0.16
HLA-DQA1P01909 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.06□□□□□ -0.16
HLA-DQA1P01909 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC14.06□□□□□ -0.16
HLA-DQA1P01909 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DQA1P01909 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DQA1P01909 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DQA1P01909 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC14.06□□□□□ -0.16
HLA-DQA1P01909 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC14.06□□□□□ -0.16
HLA-DQA1P01909 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DQA1P01909 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC14.06□□□□□ -0.16
HLA-DQA1P01909 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
HLA-DQA1P01909 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC14.06□□□□□ -0.16
HLA-DQA1P01909 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC14.06□□□□□ -0.16
HLA-DQA1P01909 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DQA1P01909 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DQA1P01909 AC123595.1-201ENST00000440769 1046 ntBASIC14.06□□□□□ -0.16
HLA-DQA1P01909 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC14.06□□□□□ -0.16
HLA-DQA1P01909 KRT18P14-201ENST00000534205 1250 ntBASIC14.06□□□□□ -0.16
HLA-DQA1P01909 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC14.06□□□□□ -0.16
HLA-DQA1P01909 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC14.06□□□□□ -0.16
HLA-DQA1P01909 CCDC92B-201ENST00000575506 885 ntBASIC14.06□□□□□ -0.16
HLA-DQA1P01909 TERF1P2-201ENST00000583350 1212 ntBASIC14.06□□□□□ -0.16
HLA-DQA1P01909 RAB43-208ENST00000615093 783 ntTSL 5 BASIC14.06□□□□□ -0.16
HLA-DQA1P01909 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
HLA-DQA1P01909 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DQA1P01909 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DQA1P01909 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DQA1P01909 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
HLA-DQA1P01909 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DQA1P01909 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
HLA-DQA1P01909 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DQA1P01909 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DQA1P01909 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
HLA-DQA1P01909 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC14.06□□□□□ -0.16
HLA-DQA1P01909 AC108860.2-201ENST00000562760 2183 ntBASIC14.06□□□□□ -0.16
HLA-DQA1P01909 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DQA1P01909 RBM17P2-201ENST00000616397 1405 ntBASIC14.06□□□□□ -0.16
HLA-DQA1P01909 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DQA1P01909 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
HLA-DQA1P01909 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
HLA-DQA1P01909 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DQA1P01909 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DQA1P01909 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC14.05□□□□□ -0.16
HLA-DQA1P01909 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC14.05□□□□□ -0.16
HLA-DQA1P01909 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
HLA-DQA1P01909 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DQA1P01909 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DQA1P01909 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DQA1P01909 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DQA1P01909 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
HLA-DQA1P01909 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC14.05□□□□□ -0.16
HLA-DQA1P01909 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.05□□□□□ -0.16
HLA-DQA1P01909 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DQA1P01909 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DQA1P01909 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.05□□□□□ -0.16
HLA-DQA1P01909 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
HLA-DQA1P01909 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DQA1P01909 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DQA1P01909 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
HLA-DQA1P01909 COX20-201ENST00000366528 568 ntTSL 2 BASIC14.05□□□□□ -0.16
HLA-DQA1P01909 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
HLA-DQA1P01909 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DQA1P01909 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC14.05□□□□□ -0.16
HLA-DQA1P01909 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DQA1P01909 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC14.05□□□□□ -0.16
HLA-DQA1P01909 SLC7A5P2-201ENST00000553010 536 ntBASIC14.05□□□□□ -0.16
HLA-DQA1P01909 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DQA1P01909 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC14.05□□□□□ -0.16
HLA-DQA1P01909 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DQA1P01909 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DQA1P01909 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.05□□□□□ -0.16
HLA-DQA1P01909 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DQA1P01909 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC14.05□□□□□ -0.16
HLA-DQA1P01909 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
HLA-DQA1P01909 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
HLA-DQA1P01909 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DQA1P01909 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DQA1P01909 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DQA1P01909 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC14.05□□□□□ -0.16
HLA-DQA1P01909 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
HLA-DQA1P01909 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DQA1P01909 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC14.05□□□□□ -0.16
HLA-DQA1P01909 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.05□□□□□ -0.16
HLA-DQA1P01909 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DQA1P01909 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DQA1P01909 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DQA1P01909 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
HLA-DQA1P01909 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DQA1P01909 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DQA1P01909 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC14.04□□□□□ -0.16
HLA-DQA1P01909 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DQA1P01909 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC14.04□□□□□ -0.16
HLA-DQA1P01909 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DQA1P01909 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DQA1P01909 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC14.04□□□□□ -0.16
HLA-DQA1P01909 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC14.04□□□□□ -0.16
HLA-DQA1P01909 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms