Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ALX3O95076 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ALX3O95076 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
ALX3O95076 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ALX3O95076 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.53■□□□□ 0.24
ALX3O95076 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.53■□□□□ 0.24
ALX3O95076 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ALX3O95076 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ALX3O95076 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
ALX3O95076 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ALX3O95076 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ALX3O95076 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.52■□□□□ 0.24
ALX3O95076 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.52■□□□□ 0.24
ALX3O95076 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.52■□□□□ 0.24
ALX3O95076 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ALX3O95076 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ALX3O95076 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ALX3O95076 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ALX3O95076 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC16.52■□□□□ 0.24
ALX3O95076 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
ALX3O95076 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16.52■□□□□ 0.24
ALX3O95076 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.52■□□□□ 0.24
ALX3O95076 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ALX3O95076 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
ALX3O95076 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
ALX3O95076 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.52■□□□□ 0.24
ALX3O95076 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
ALX3O95076 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ALX3O95076 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
ALX3O95076 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.52■□□□□ 0.23
ALX3O95076 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
ALX3O95076 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
ALX3O95076 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ALX3O95076 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ALX3O95076 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.51■□□□□ 0.23
ALX3O95076 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ALX3O95076 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.51■□□□□ 0.23
ALX3O95076 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.51■□□□□ 0.23
ALX3O95076 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ALX3O95076 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ALX3O95076 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.51■□□□□ 0.23
ALX3O95076 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ALX3O95076 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ALX3O95076 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
ALX3O95076 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ALX3O95076 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ALX3O95076 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC16.51■□□□□ 0.23
ALX3O95076 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ALX3O95076 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
ALX3O95076 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ALX3O95076 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ALX3O95076 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.51■□□□□ 0.23
ALX3O95076 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
ALX3O95076 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ALX3O95076 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
ALX3O95076 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.51■□□□□ 0.23
ALX3O95076 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ALX3O95076 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.5■□□□□ 0.23
ALX3O95076 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
ALX3O95076 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
ALX3O95076 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ALX3O95076 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ALX3O95076 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
ALX3O95076 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.5■□□□□ 0.23
ALX3O95076 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.5■□□□□ 0.23
ALX3O95076 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
ALX3O95076 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ALX3O95076 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.5■□□□□ 0.23
ALX3O95076 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ALX3O95076 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ALX3O95076 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.5■□□□□ 0.23
ALX3O95076 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.5■□□□□ 0.23
ALX3O95076 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.5■□□□□ 0.23
ALX3O95076 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ALX3O95076 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.5■□□□□ 0.23
ALX3O95076 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.5■□□□□ 0.23
ALX3O95076 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.5■□□□□ 0.23
ALX3O95076 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.5■□□□□ 0.23
ALX3O95076 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.5■□□□□ 0.23
ALX3O95076 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.5■□□□□ 0.23
ALX3O95076 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
ALX3O95076 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ALX3O95076 AC008687.6-201ENST00000596318 630 ntBASIC16.5■□□□□ 0.23
ALX3O95076 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ALX3O95076 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
ALX3O95076 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
ALX3O95076 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.5■□□□□ 0.23
ALX3O95076 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ALX3O95076 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ALX3O95076 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
ALX3O95076 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.5■□□□□ 0.23
ALX3O95076 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ALX3O95076 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
ALX3O95076 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.49■□□□□ 0.23
ALX3O95076 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ALX3O95076 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC16.49■□□□□ 0.23
ALX3O95076 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ALX3O95076 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
ALX3O95076 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.49■□□□□ 0.23
ALX3O95076 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms