Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 NAT14-202ENST00000587400 416 ntTSL 5 BASIC23.98■■□□□ 1.43
PTCD1O75127 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PTCD1O75127 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
PTCD1O75127 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
PTCD1O75127 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC23.98■■□□□ 1.43
PTCD1O75127 AC034236.2-201ENST00000606662 1610 ntBASIC23.98■■□□□ 1.43
PTCD1O75127 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PTCD1O75127 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PTCD1O75127 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC23.98■■□□□ 1.43
PTCD1O75127 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
PTCD1O75127 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC23.98■■□□□ 1.43
PTCD1O75127 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PTCD1O75127 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
PTCD1O75127 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
PTCD1O75127 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC23.97■■□□□ 1.43
PTCD1O75127 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
PTCD1O75127 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC23.97■■□□□ 1.43
PTCD1O75127 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC23.97■■□□□ 1.43
PTCD1O75127 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
PTCD1O75127 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
PTCD1O75127 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
PTCD1O75127 AFG3L1P-217ENST00000557444 2447 ntBASIC23.97■■□□□ 1.43
PTCD1O75127 AC233702.3-201ENST00000578656 1387 ntBASIC23.97■■□□□ 1.43
PTCD1O75127 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC23.97■■□□□ 1.43
PTCD1O75127 LINC01711-201ENST00000598340 967 ntBASIC23.97■■□□□ 1.43
PTCD1O75127 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC23.97■■□□□ 1.43
PTCD1O75127 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PTCD1O75127 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PTCD1O75127 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC23.96■■□□□ 1.43
PTCD1O75127 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
PTCD1O75127 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PTCD1O75127 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC23.96■■□□□ 1.43
PTCD1O75127 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC23.96■■□□□ 1.43
PTCD1O75127 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC23.96■■□□□ 1.43
PTCD1O75127 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
PTCD1O75127 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PTCD1O75127 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
PTCD1O75127 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC23.96■■□□□ 1.43
PTCD1O75127 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC23.96■■□□□ 1.43
PTCD1O75127 TK1-205ENST00000590862 642 ntTSL 3 BASIC23.96■■□□□ 1.43
PTCD1O75127 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
PTCD1O75127 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC23.96■■□□□ 1.43
PTCD1O75127 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC23.96■■□□□ 1.43
PTCD1O75127 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PTCD1O75127 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC23.96■■□□□ 1.43
PTCD1O75127 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC23.96■■□□□ 1.43
PTCD1O75127 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
PTCD1O75127 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
PTCD1O75127 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.43
PTCD1O75127 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC23.95■■□□□ 1.43
PTCD1O75127 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC23.95■■□□□ 1.42
PTCD1O75127 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC23.95■■□□□ 1.42
PTCD1O75127 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
PTCD1O75127 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC23.95■■□□□ 1.42
PTCD1O75127 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC23.95■■□□□ 1.42
PTCD1O75127 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC23.95■■□□□ 1.42
PTCD1O75127 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC23.95■■□□□ 1.42
PTCD1O75127 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC23.95■■□□□ 1.42
PTCD1O75127 GPR32P1-201ENST00000601788 811 ntBASIC23.95■■□□□ 1.42
PTCD1O75127 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
PTCD1O75127 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC23.95■■□□□ 1.42
PTCD1O75127 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PTCD1O75127 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PTCD1O75127 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PTCD1O75127 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PTCD1O75127 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC23.94■■□□□ 1.42
PTCD1O75127 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PTCD1O75127 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PTCD1O75127 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PTCD1O75127 BID-204ENST00000399767 2129 ntTSL 2 BASIC23.94■■□□□ 1.42
PTCD1O75127 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC23.94■■□□□ 1.42
PTCD1O75127 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC23.94■■□□□ 1.42
PTCD1O75127 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
PTCD1O75127 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC23.94■■□□□ 1.42
PTCD1O75127 AC099336.1-202ENST00000602961 463 ntBASIC23.94■■□□□ 1.42
PTCD1O75127 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PTCD1O75127 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC23.94■■□□□ 1.42
PTCD1O75127 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC23.94■■□□□ 1.42
PTCD1O75127 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC23.94■■□□□ 1.42
PTCD1O75127 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PTCD1O75127 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
PTCD1O75127 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
PTCD1O75127 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
PTCD1O75127 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PTCD1O75127 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
PTCD1O75127 IGHGP-201ENST00000390555 1178 ntBASIC23.93■■□□□ 1.42
PTCD1O75127 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC23.93■■□□□ 1.42
PTCD1O75127 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PTCD1O75127 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
PTCD1O75127 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
PTCD1O75127 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
PTCD1O75127 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
PTCD1O75127 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PTCD1O75127 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PTCD1O75127 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
PTCD1O75127 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PTCD1O75127 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
PTCD1O75127 DFFB-203ENST00000341385 572 ntTSL 5 BASIC23.92■■□□□ 1.42
PTCD1O75127 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
PTCD1O75127 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms