Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
SLC28A2O43868 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
SLC28A2O43868 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
SLC28A2O43868 AC104417.2-201ENST00000562989 1793 ntBASIC18■□□□□ 0.47
SLC28A2O43868 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC28A2O43868 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
SLC28A2O43868 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18■□□□□ 0.47
SLC28A2O43868 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SLC28A2O43868 ANKRD20A18P-201ENST00000359341 492 ntBASIC18■□□□□ 0.47
SLC28A2O43868 HIST1H2APS4-201ENST00000362070 348 ntBASIC18■□□□□ 0.47
SLC28A2O43868 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18■□□□□ 0.47
SLC28A2O43868 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC28A2O43868 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC28A2O43868 NME1-207ENST00000480143 964 ntTSL 2 BASIC18■□□□□ 0.47
SLC28A2O43868 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18■□□□□ 0.47
SLC28A2O43868 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18■□□□□ 0.47
SLC28A2O43868 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18■□□□□ 0.47
SLC28A2O43868 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC18■□□□□ 0.47
SLC28A2O43868 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18■□□□□ 0.47
SLC28A2O43868 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18■□□□□ 0.47
SLC28A2O43868 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
SLC28A2O43868 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
SLC28A2O43868 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18■□□□□ 0.47
SLC28A2O43868 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC28A2O43868 AL049812.1-201ENST00000432563 2267 ntBASIC18■□□□□ 0.47
SLC28A2O43868 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
SLC28A2O43868 SDHAP1-207ENST00000440850 2000 ntBASIC17.99■□□□□ 0.47
SLC28A2O43868 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.99■□□□□ 0.47
SLC28A2O43868 AC005332.1-201ENST00000577698 1310 ntBASIC17.99■□□□□ 0.47
SLC28A2O43868 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC28A2O43868 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC28A2O43868 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
SLC28A2O43868 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.99■□□□□ 0.47
SLC28A2O43868 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.99■□□□□ 0.47
SLC28A2O43868 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC28A2O43868 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
SLC28A2O43868 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC28A2O43868 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SLC28A2O43868 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC28A2O43868 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SLC28A2O43868 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SLC28A2O43868 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.99■□□□□ 0.47
SLC28A2O43868 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
SLC28A2O43868 PVRIG2P-201ENST00000435460 978 ntBASIC17.99■□□□□ 0.47
SLC28A2O43868 TUBB8P6-201ENST00000436895 1288 ntBASIC17.99■□□□□ 0.47
SLC28A2O43868 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.99■□□□□ 0.47
SLC28A2O43868 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.99■□□□□ 0.47
SLC28A2O43868 B3GAT3P1-201ENST00000471720 806 ntBASIC17.99■□□□□ 0.47
SLC28A2O43868 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.99■□□□□ 0.47
SLC28A2O43868 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.99■□□□□ 0.47
SLC28A2O43868 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.99■□□□□ 0.47
SLC28A2O43868 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.99■□□□□ 0.47
SLC28A2O43868 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SLC28A2O43868 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.99■□□□□ 0.47
SLC28A2O43868 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.99■□□□□ 0.47
SLC28A2O43868 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.99■□□□□ 0.47
SLC28A2O43868 AC116562.4-202ENST00000641738 218 ntBASIC17.99■□□□□ 0.47
SLC28A2O43868 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC28A2O43868 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC28A2O43868 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.99■□□□□ 0.47
SLC28A2O43868 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC28A2O43868 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.99■□□□□ 0.47
SLC28A2O43868 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.99■□□□□ 0.47
SLC28A2O43868 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.98■□□□□ 0.47
SLC28A2O43868 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
SLC28A2O43868 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC28A2O43868 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC28A2O43868 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC28A2O43868 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SLC28A2O43868 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.98■□□□□ 0.47
SLC28A2O43868 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.98■□□□□ 0.47
SLC28A2O43868 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SLC28A2O43868 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
SLC28A2O43868 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
SLC28A2O43868 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC28A2O43868 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
SLC28A2O43868 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.98■□□□□ 0.47
SLC28A2O43868 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.98■□□□□ 0.47
SLC28A2O43868 HOMER2P1-201ENST00000455653 964 ntBASIC17.98■□□□□ 0.47
SLC28A2O43868 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.98■□□□□ 0.47
SLC28A2O43868 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.98■□□□□ 0.47
SLC28A2O43868 SLC25A1P4-201ENST00000567977 778 ntBASIC17.98■□□□□ 0.47
SLC28A2O43868 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
SLC28A2O43868 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.98■□□□□ 0.47
SLC28A2O43868 AC011558.1-201ENST00000623459 338 ntBASIC17.98■□□□□ 0.47
SLC28A2O43868 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.98■□□□□ 0.47
SLC28A2O43868 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC28A2O43868 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC28A2O43868 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC28A2O43868 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.98■□□□□ 0.47
SLC28A2O43868 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC28A2O43868 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC28A2O43868 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
SLC28A2O43868 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
SLC28A2O43868 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC28A2O43868 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.98■□□□□ 0.47
SLC28A2O43868 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.98■□□□□ 0.47
SLC28A2O43868 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC28A2O43868 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC28A2O43868 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms