Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP2AO43633 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP2AO43633 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP2AO43633 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CHMP2AO43633 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP2AO43633 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC21.01■□□□□ 0.95
CHMP2AO43633 MTMR9LP-203ENST00000426597 1545 ntBASIC21.01■□□□□ 0.95
CHMP2AO43633 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP2AO43633 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP2AO43633 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CHMP2AO43633 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC21.01■□□□□ 0.95
CHMP2AO43633 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21.01■□□□□ 0.95
CHMP2AO43633 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP2AO43633 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC21.01■□□□□ 0.95
CHMP2AO43633 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP2AO43633 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CHMP2AO43633 AL031432.5-201ENST00000641059 760 ntBASIC21.01■□□□□ 0.95
CHMP2AO43633 AC083906.6-201ENST00000641366 219 ntBASIC21.01■□□□□ 0.95
CHMP2AO43633 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP2AO43633 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC21.01■□□□□ 0.95
CHMP2AO43633 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CHMP2AO43633 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC21.01■□□□□ 0.95
CHMP2AO43633 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP2AO43633 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP2AO43633 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC21.01■□□□□ 0.95
CHMP2AO43633 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP2AO43633 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP2AO43633 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC21.01■□□□□ 0.95
CHMP2AO43633 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC21.01■□□□□ 0.95
CHMP2AO43633 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CHMP2AO43633 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC21■□□□□ 0.95
CHMP2AO43633 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHMP2AO43633 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CHMP2AO43633 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21■□□□□ 0.95
CHMP2AO43633 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
CHMP2AO43633 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CHMP2AO43633 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CHMP2AO43633 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC21■□□□□ 0.95
CHMP2AO43633 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC21■□□□□ 0.95
CHMP2AO43633 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC21■□□□□ 0.95
CHMP2AO43633 NFYC-AS1-201ENST00000606277 1687 ntBASIC21■□□□□ 0.95
CHMP2AO43633 AL357033.4-201ENST00000617703 1807 ntBASIC21■□□□□ 0.95
CHMP2AO43633 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHMP2AO43633 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC21■□□□□ 0.95
CHMP2AO43633 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC21■□□□□ 0.95
CHMP2AO43633 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21■□□□□ 0.95
CHMP2AO43633 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC21■□□□□ 0.95
CHMP2AO43633 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC21■□□□□ 0.95
CHMP2AO43633 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC21■□□□□ 0.95
CHMP2AO43633 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CHMP2AO43633 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHMP2AO43633 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC21■□□□□ 0.95
CHMP2AO43633 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC21■□□□□ 0.95
CHMP2AO43633 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHMP2AO43633 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CHMP2AO43633 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHMP2AO43633 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHMP2AO43633 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHMP2AO43633 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.99■□□□□ 0.95
CHMP2AO43633 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CHMP2AO43633 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHMP2AO43633 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CHMP2AO43633 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHMP2AO43633 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CHMP2AO43633 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHMP2AO43633 AP000974.1-201ENST00000623909 2387 ntBASIC20.99■□□□□ 0.95
CHMP2AO43633 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHMP2AO43633 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.99■□□□□ 0.95
CHMP2AO43633 MIR564-202ENST00000385049 94 ntBASIC20.99■□□□□ 0.95
CHMP2AO43633 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CHMP2AO43633 KRT18P23-201ENST00000435622 1283 ntBASIC20.99■□□□□ 0.95
CHMP2AO43633 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.99■□□□□ 0.95
CHMP2AO43633 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.99■□□□□ 0.95
CHMP2AO43633 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CHMP2AO43633 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHMP2AO43633 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHMP2AO43633 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CHMP2AO43633 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHMP2AO43633 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHMP2AO43633 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.98■□□□□ 0.95
CHMP2AO43633 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CHMP2AO43633 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.98■□□□□ 0.95
CHMP2AO43633 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHMP2AO43633 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHMP2AO43633 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHMP2AO43633 ARMC10P1-201ENST00000313754 855 ntBASIC20.98■□□□□ 0.95
CHMP2AO43633 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.98■□□□□ 0.95
CHMP2AO43633 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHMP2AO43633 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CHMP2AO43633 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.98■□□□□ 0.95
CHMP2AO43633 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.98■□□□□ 0.95
CHMP2AO43633 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.98■□□□□ 0.95
CHMP2AO43633 KRT18P38-201ENST00000449496 1282 ntBASIC20.98■□□□□ 0.95
CHMP2AO43633 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.98■□□□□ 0.95
CHMP2AO43633 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.98■□□□□ 0.95
CHMP2AO43633 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CHMP2AO43633 AC112497.1-201ENST00000624824 639 ntBASIC20.98■□□□□ 0.95
CHMP2AO43633 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.98■□□□□ 0.95
CHMP2AO43633 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.98■□□□□ 0.95
CHMP2AO43633 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms