Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 KRT8P41-201ENST00000533985 1514 ntBASIC18.79■□□□□ 0.6
TRIM38O00635 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM38O00635 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM38O00635 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM38O00635 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.79■□□□□ 0.6
TRIM38O00635 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM38O00635 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM38O00635 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM38O00635 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
TRIM38O00635 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM38O00635 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM38O00635 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.79■□□□□ 0.6
TRIM38O00635 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM38O00635 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.79■□□□□ 0.6
TRIM38O00635 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.79■□□□□ 0.6
TRIM38O00635 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM38O00635 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.79■□□□□ 0.6
TRIM38O00635 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.79■□□□□ 0.6
TRIM38O00635 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.79■□□□□ 0.6
TRIM38O00635 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.79■□□□□ 0.6
TRIM38O00635 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
TRIM38O00635 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM38O00635 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
TRIM38O00635 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM38O00635 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.79■□□□□ 0.6
TRIM38O00635 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM38O00635 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.79■□□□□ 0.6
TRIM38O00635 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.79■□□□□ 0.6
TRIM38O00635 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM38O00635 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM38O00635 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM38O00635 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM38O00635 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.79■□□□□ 0.6
TRIM38O00635 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.78■□□□□ 0.6
TRIM38O00635 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.78■□□□□ 0.6
TRIM38O00635 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM38O00635 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM38O00635 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM38O00635 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
TRIM38O00635 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM38O00635 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM38O00635 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM38O00635 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM38O00635 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM38O00635 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM38O00635 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM38O00635 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM38O00635 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.78■□□□□ 0.6
TRIM38O00635 CA15P1-201ENST00000481698 905 ntBASIC18.78■□□□□ 0.6
TRIM38O00635 CKBP1-201ENST00000565489 1086 ntBASIC18.78■□□□□ 0.6
TRIM38O00635 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.78■□□□□ 0.6
TRIM38O00635 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.78■□□□□ 0.6
TRIM38O00635 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
TRIM38O00635 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.78■□□□□ 0.6
TRIM38O00635 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
TRIM38O00635 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.78■□□□□ 0.6
TRIM38O00635 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TRIM38O00635 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM38O00635 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
TRIM38O00635 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.77■□□□□ 0.6
TRIM38O00635 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.77■□□□□ 0.6
TRIM38O00635 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM38O00635 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM38O00635 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
TRIM38O00635 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM38O00635 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM38O00635 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM38O00635 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.77■□□□□ 0.6
TRIM38O00635 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.77■□□□□ 0.6
TRIM38O00635 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM38O00635 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM38O00635 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM38O00635 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM38O00635 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.77■□□□□ 0.6
TRIM38O00635 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.77■□□□□ 0.6
TRIM38O00635 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM38O00635 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.77■□□□□ 0.6
TRIM38O00635 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.77■□□□□ 0.6
TRIM38O00635 AL023973.1-201ENST00000624619 620 ntBASIC18.77■□□□□ 0.6
TRIM38O00635 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
TRIM38O00635 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.77■□□□□ 0.6
TRIM38O00635 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.77■□□□□ 0.6
TRIM38O00635 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
TRIM38O00635 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
TRIM38O00635 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TRIM38O00635 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TRIM38O00635 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TRIM38O00635 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TRIM38O00635 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.77■□□□□ 0.59
TRIM38O00635 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.76■□□□□ 0.59
TRIM38O00635 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.76■□□□□ 0.59
TRIM38O00635 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.76■□□□□ 0.59
TRIM38O00635 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.76■□□□□ 0.59
TRIM38O00635 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM38O00635 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.76■□□□□ 0.59
TRIM38O00635 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM38O00635 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
TRIM38O00635 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM38O00635 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM38O00635 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms