Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC25.29■■□□□ 1.64
SBNO1A3KN83 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC25.29■■□□□ 1.64
SBNO1A3KN83 REEP1-209ENST00000541910 969 ntTSL 2 BASIC25.29■■□□□ 1.64
SBNO1A3KN83 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC25.29■■□□□ 1.64
SBNO1A3KN83 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
SBNO1A3KN83 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
SBNO1A3KN83 USP48-205ENST00000421625 2818 ntTSL 2 BASIC25.29■■□□□ 1.64
SBNO1A3KN83 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SBNO1A3KN83 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
SBNO1A3KN83 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SBNO1A3KN83 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
SBNO1A3KN83 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SBNO1A3KN83 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SBNO1A3KN83 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SBNO1A3KN83 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
SBNO1A3KN83 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
SBNO1A3KN83 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC25.28■■□□□ 1.64
SBNO1A3KN83 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SBNO1A3KN83 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SBNO1A3KN83 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC25.28■■□□□ 1.64
SBNO1A3KN83 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SBNO1A3KN83 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC25.28■■□□□ 1.64
SBNO1A3KN83 MIR1233-2-201ENST00000408138 82 ntBASIC25.28■■□□□ 1.64
SBNO1A3KN83 MIR1233-1-201ENST00000408722 82 ntBASIC25.28■■□□□ 1.64
SBNO1A3KN83 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SBNO1A3KN83 MINOS1P3-201ENST00000457048 203 ntBASIC25.28■■□□□ 1.64
SBNO1A3KN83 AF186996.4-201ENST00000467186 377 ntBASIC25.28■■□□□ 1.64
SBNO1A3KN83 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC25.28■■□□□ 1.64
SBNO1A3KN83 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SBNO1A3KN83 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC25.28■■□□□ 1.64
SBNO1A3KN83 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC25.28■■□□□ 1.64
SBNO1A3KN83 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SBNO1A3KN83 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
SBNO1A3KN83 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SBNO1A3KN83 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
SBNO1A3KN83 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
SBNO1A3KN83 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
SBNO1A3KN83 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC25.27■■□□□ 1.64
SBNO1A3KN83 CYP51A1P1-201ENST00000492267 1507 ntBASIC25.27■■□□□ 1.64
SBNO1A3KN83 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SBNO1A3KN83 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC25.27■■□□□ 1.64
SBNO1A3KN83 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SBNO1A3KN83 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
SBNO1A3KN83 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC25.27■■□□□ 1.64
SBNO1A3KN83 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC25.27■■□□□ 1.64
SBNO1A3KN83 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SBNO1A3KN83 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SBNO1A3KN83 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
SBNO1A3KN83 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC25.27■■□□□ 1.64
SBNO1A3KN83 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SBNO1A3KN83 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SBNO1A3KN83 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC25.27■■□□□ 1.64
SBNO1A3KN83 AC114341.1-201ENST00000618070 349 ntBASIC25.27■■□□□ 1.64
SBNO1A3KN83 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
SBNO1A3KN83 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
SBNO1A3KN83 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
SBNO1A3KN83 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SBNO1A3KN83 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SBNO1A3KN83 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC25.26■■□□□ 1.64
SBNO1A3KN83 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC25.26■■□□□ 1.63
SBNO1A3KN83 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SBNO1A3KN83 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC25.26■■□□□ 1.63
SBNO1A3KN83 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC25.26■■□□□ 1.63
SBNO1A3KN83 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SBNO1A3KN83 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SBNO1A3KN83 AC009065.1-201ENST00000564055 1225 ntBASIC25.26■■□□□ 1.63
SBNO1A3KN83 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
SBNO1A3KN83 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC25.26■■□□□ 1.63
SBNO1A3KN83 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC25.26■■□□□ 1.63
SBNO1A3KN83 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
SBNO1A3KN83 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SBNO1A3KN83 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
SBNO1A3KN83 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
SBNO1A3KN83 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC25.25■■□□□ 1.63
SBNO1A3KN83 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
SBNO1A3KN83 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC25.25■■□□□ 1.63
SBNO1A3KN83 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC25.25■■□□□ 1.63
SBNO1A3KN83 POLD2P1-201ENST00000511220 997 ntBASIC25.25■■□□□ 1.63
SBNO1A3KN83 AC092865.5-201ENST00000545435 363 ntBASIC25.25■■□□□ 1.63
SBNO1A3KN83 AC011840.4-201ENST00000578471 627 ntBASIC25.25■■□□□ 1.63
SBNO1A3KN83 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
SBNO1A3KN83 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC25.25■■□□□ 1.63
SBNO1A3KN83 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
SBNO1A3KN83 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SBNO1A3KN83 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
SBNO1A3KN83 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SBNO1A3KN83 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SBNO1A3KN83 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC25.25■■□□□ 1.63
SBNO1A3KN83 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SBNO1A3KN83 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC25.25■■□□□ 1.63
SBNO1A3KN83 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
SBNO1A3KN83 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC25.24■■□□□ 1.63
SBNO1A3KN83 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC25.24■■□□□ 1.63
SBNO1A3KN83 COX10-202ENST00000429152 875 ntTSL 2 BASIC25.24■■□□□ 1.63
SBNO1A3KN83 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC25.24■■□□□ 1.63
SBNO1A3KN83 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SBNO1A3KN83 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC25.24■■□□□ 1.63
SBNO1A3KN83 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC25.24■■□□□ 1.63
SBNO1A3KN83 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
SBNO1A3KN83 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms