Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.27■□□□□ 0.36
HRH3Q9Y5N1 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.27■□□□□ 0.36
HRH3Q9Y5N1 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.27■□□□□ 0.36
HRH3Q9Y5N1 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HRH3Q9Y5N1 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HRH3Q9Y5N1 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.27■□□□□ 0.36
HRH3Q9Y5N1 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HRH3Q9Y5N1 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HRH3Q9Y5N1 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
HRH3Q9Y5N1 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
HRH3Q9Y5N1 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
HRH3Q9Y5N1 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HRH3Q9Y5N1 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HRH3Q9Y5N1 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HRH3Q9Y5N1 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HRH3Q9Y5N1 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
HRH3Q9Y5N1 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
HRH3Q9Y5N1 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
HRH3Q9Y5N1 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.26■□□□□ 0.35
HRH3Q9Y5N1 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
HRH3Q9Y5N1 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
HRH3Q9Y5N1 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HRH3Q9Y5N1 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.26■□□□□ 0.35
HRH3Q9Y5N1 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
HRH3Q9Y5N1 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
HRH3Q9Y5N1 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
HRH3Q9Y5N1 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
HRH3Q9Y5N1 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.26■□□□□ 0.35
HRH3Q9Y5N1 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.26■□□□□ 0.35
HRH3Q9Y5N1 CCR12P-201ENST00000446203 998 ntBASIC17.26■□□□□ 0.35
HRH3Q9Y5N1 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.26■□□□□ 0.35
HRH3Q9Y5N1 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.26■□□□□ 0.35
HRH3Q9Y5N1 AC022616.7-201ENST00000525383 220 ntBASIC17.26■□□□□ 0.35
HRH3Q9Y5N1 AP003041.3-201ENST00000527151 707 ntBASIC17.26■□□□□ 0.35
HRH3Q9Y5N1 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.26■□□□□ 0.35
HRH3Q9Y5N1 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.26■□□□□ 0.35
HRH3Q9Y5N1 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HRH3Q9Y5N1 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HRH3Q9Y5N1 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
HRH3Q9Y5N1 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HRH3Q9Y5N1 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HRH3Q9Y5N1 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
HRH3Q9Y5N1 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HRH3Q9Y5N1 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
HRH3Q9Y5N1 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HRH3Q9Y5N1 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.25■□□□□ 0.35
HRH3Q9Y5N1 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
HRH3Q9Y5N1 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HRH3Q9Y5N1 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.25■□□□□ 0.35
HRH3Q9Y5N1 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HRH3Q9Y5N1 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HRH3Q9Y5N1 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HRH3Q9Y5N1 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HRH3Q9Y5N1 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
HRH3Q9Y5N1 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.25■□□□□ 0.35
HRH3Q9Y5N1 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HRH3Q9Y5N1 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HRH3Q9Y5N1 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HRH3Q9Y5N1 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HRH3Q9Y5N1 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HRH3Q9Y5N1 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.25■□□□□ 0.35
HRH3Q9Y5N1 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HRH3Q9Y5N1 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.25■□□□□ 0.35
HRH3Q9Y5N1 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.25■□□□□ 0.35
HRH3Q9Y5N1 AL353719.1-201ENST00000566847 864 ntBASIC17.25■□□□□ 0.35
HRH3Q9Y5N1 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HRH3Q9Y5N1 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.25■□□□□ 0.35
HRH3Q9Y5N1 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
HRH3Q9Y5N1 AC010653.2-201ENST00000623505 997 ntBASIC17.25■□□□□ 0.35
HRH3Q9Y5N1 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HRH3Q9Y5N1 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
HRH3Q9Y5N1 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HRH3Q9Y5N1 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HRH3Q9Y5N1 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HRH3Q9Y5N1 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
HRH3Q9Y5N1 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HRH3Q9Y5N1 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HRH3Q9Y5N1 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.25■□□□□ 0.35
HRH3Q9Y5N1 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HRH3Q9Y5N1 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
HRH3Q9Y5N1 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
HRH3Q9Y5N1 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HRH3Q9Y5N1 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.24■□□□□ 0.35
HRH3Q9Y5N1 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HRH3Q9Y5N1 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HRH3Q9Y5N1 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.24■□□□□ 0.35
HRH3Q9Y5N1 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.24■□□□□ 0.35
HRH3Q9Y5N1 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HRH3Q9Y5N1 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.24■□□□□ 0.35
HRH3Q9Y5N1 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
HRH3Q9Y5N1 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.24■□□□□ 0.35
HRH3Q9Y5N1 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
HRH3Q9Y5N1 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.24■□□□□ 0.35
HRH3Q9Y5N1 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.24■□□□□ 0.35
HRH3Q9Y5N1 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HRH3Q9Y5N1 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
HRH3Q9Y5N1 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HRH3Q9Y5N1 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
HRH3Q9Y5N1 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HRH3Q9Y5N1 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms