Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB11Q9Y5F2 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB11Q9Y5F2 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHB11Q9Y5F2 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHB11Q9Y5F2 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHB11Q9Y5F2 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
PCDHB11Q9Y5F2 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.33■□□□□ 0.53
PCDHB11Q9Y5F2 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.33■□□□□ 0.53
PCDHB11Q9Y5F2 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
PCDHB11Q9Y5F2 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHB11Q9Y5F2 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB11Q9Y5F2 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB11Q9Y5F2 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB11Q9Y5F2 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB11Q9Y5F2 AL031133.1-201ENST00000406807 723 ntBASIC18.33■□□□□ 0.52
PCDHB11Q9Y5F2 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB11Q9Y5F2 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.33■□□□□ 0.52
PCDHB11Q9Y5F2 AL353719.1-201ENST00000566847 864 ntBASIC18.33■□□□□ 0.52
PCDHB11Q9Y5F2 AC141257.4-201ENST00000634557 245 ntBASIC18.33■□□□□ 0.52
PCDHB11Q9Y5F2 AC136944.6-201ENST00000634818 245 ntBASIC18.33■□□□□ 0.52
PCDHB11Q9Y5F2 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB11Q9Y5F2 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
PCDHB11Q9Y5F2 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB11Q9Y5F2 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
PCDHB11Q9Y5F2 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB11Q9Y5F2 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHB11Q9Y5F2 AL161938.1-201ENST00000569833 2180 ntBASIC18.32■□□□□ 0.52
PCDHB11Q9Y5F2 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB11Q9Y5F2 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PCDHB11Q9Y5F2 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHB11Q9Y5F2 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PCDHB11Q9Y5F2 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB11Q9Y5F2 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB11Q9Y5F2 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
PCDHB11Q9Y5F2 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDHB11Q9Y5F2 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB11Q9Y5F2 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB11Q9Y5F2 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB11Q9Y5F2 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHB11Q9Y5F2 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB11Q9Y5F2 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB11Q9Y5F2 HOMER2P1-201ENST00000455653 964 ntBASIC18.32■□□□□ 0.52
PCDHB11Q9Y5F2 KRT18P56-201ENST00000507275 550 ntBASIC18.32■□□□□ 0.52
PCDHB11Q9Y5F2 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB11Q9Y5F2 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.32■□□□□ 0.52
PCDHB11Q9Y5F2 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.32■□□□□ 0.52
PCDHB11Q9Y5F2 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB11Q9Y5F2 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB11Q9Y5F2 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PCDHB11Q9Y5F2 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB11Q9Y5F2 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB11Q9Y5F2 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB11Q9Y5F2 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB11Q9Y5F2 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
PCDHB11Q9Y5F2 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
PCDHB11Q9Y5F2 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHB11Q9Y5F2 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHB11Q9Y5F2 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB11Q9Y5F2 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PCDHB11Q9Y5F2 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB11Q9Y5F2 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
PCDHB11Q9Y5F2 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB11Q9Y5F2 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.31■□□□□ 0.52
PCDHB11Q9Y5F2 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHB11Q9Y5F2 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PCDHB11Q9Y5F2 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
PCDHB11Q9Y5F2 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB11Q9Y5F2 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PCDHB11Q9Y5F2 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHB11Q9Y5F2 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHB11Q9Y5F2 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB11Q9Y5F2 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.31■□□□□ 0.52
PCDHB11Q9Y5F2 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHB11Q9Y5F2 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.31■□□□□ 0.52
PCDHB11Q9Y5F2 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.31■□□□□ 0.52
PCDHB11Q9Y5F2 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.31■□□□□ 0.52
PCDHB11Q9Y5F2 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHB11Q9Y5F2 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.31■□□□□ 0.52
PCDHB11Q9Y5F2 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHB11Q9Y5F2 AL023803.3-201ENST00000615559 522 ntBASIC18.31■□□□□ 0.52
PCDHB11Q9Y5F2 MYC-208ENST00000641036 567 ntBASIC18.31■□□□□ 0.52
PCDHB11Q9Y5F2 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB11Q9Y5F2 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHB11Q9Y5F2 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB11Q9Y5F2 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PCDHB11Q9Y5F2 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB11Q9Y5F2 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB11Q9Y5F2 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB11Q9Y5F2 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB11Q9Y5F2 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB11Q9Y5F2 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PCDHB11Q9Y5F2 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB11Q9Y5F2 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
PCDHB11Q9Y5F2 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
PCDHB11Q9Y5F2 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB11Q9Y5F2 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB11Q9Y5F2 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB11Q9Y5F2 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHB11Q9Y5F2 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.3■□□□□ 0.52
PCDHB11Q9Y5F2 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms