Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB13Q9Y5F0 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB13Q9Y5F0 MTMR9LP-203ENST00000426597 1545 ntBASIC20.65■□□□□ 0.9
PCDHB13Q9Y5F0 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PCDHB13Q9Y5F0 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB13Q9Y5F0 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDHB13Q9Y5F0 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.65■□□□□ 0.9
PCDHB13Q9Y5F0 AC087499.1-201ENST00000418141 1075 ntBASIC20.65■□□□□ 0.9
PCDHB13Q9Y5F0 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDHB13Q9Y5F0 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PCDHB13Q9Y5F0 AC012497.1-201ENST00000429392 575 ntBASIC20.65■□□□□ 0.9
PCDHB13Q9Y5F0 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.65■□□□□ 0.9
PCDHB13Q9Y5F0 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.65■□□□□ 0.9
PCDHB13Q9Y5F0 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.65■□□□□ 0.9
PCDHB13Q9Y5F0 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDHB13Q9Y5F0 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.65■□□□□ 0.9
PCDHB13Q9Y5F0 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDHB13Q9Y5F0 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB13Q9Y5F0 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB13Q9Y5F0 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB13Q9Y5F0 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB13Q9Y5F0 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
PCDHB13Q9Y5F0 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PCDHB13Q9Y5F0 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
PCDHB13Q9Y5F0 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
PCDHB13Q9Y5F0 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
PCDHB13Q9Y5F0 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHB13Q9Y5F0 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHB13Q9Y5F0 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHB13Q9Y5F0 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.64■□□□□ 0.89
PCDHB13Q9Y5F0 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHB13Q9Y5F0 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHB13Q9Y5F0 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.64■□□□□ 0.89
PCDHB13Q9Y5F0 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHB13Q9Y5F0 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHB13Q9Y5F0 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
PCDHB13Q9Y5F0 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.64■□□□□ 0.89
PCDHB13Q9Y5F0 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.64■□□□□ 0.89
PCDHB13Q9Y5F0 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
PCDHB13Q9Y5F0 AC073912.3-201ENST00000624414 853 ntBASIC20.64■□□□□ 0.89
PCDHB13Q9Y5F0 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHB13Q9Y5F0 AC008556.1-201ENST00000610908 2040 ntBASIC20.64■□□□□ 0.89
PCDHB13Q9Y5F0 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
PCDHB13Q9Y5F0 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
PCDHB13Q9Y5F0 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHB13Q9Y5F0 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHB13Q9Y5F0 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.64■□□□□ 0.89
PCDHB13Q9Y5F0 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDHB13Q9Y5F0 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHB13Q9Y5F0 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDHB13Q9Y5F0 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.63■□□□□ 0.89
PCDHB13Q9Y5F0 LINC01568-207ENST00000641790 1380 ntBASIC20.63■□□□□ 0.89
PCDHB13Q9Y5F0 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDHB13Q9Y5F0 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.63■□□□□ 0.89
PCDHB13Q9Y5F0 AL357033.4-201ENST00000617703 1807 ntBASIC20.63■□□□□ 0.89
PCDHB13Q9Y5F0 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHB13Q9Y5F0 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHB13Q9Y5F0 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDHB13Q9Y5F0 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.63■□□□□ 0.89
PCDHB13Q9Y5F0 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHB13Q9Y5F0 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.63■□□□□ 0.89
PCDHB13Q9Y5F0 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
PCDHB13Q9Y5F0 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHB13Q9Y5F0 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHB13Q9Y5F0 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHB13Q9Y5F0 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHB13Q9Y5F0 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHB13Q9Y5F0 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHB13Q9Y5F0 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
PCDHB13Q9Y5F0 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB13Q9Y5F0 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
PCDHB13Q9Y5F0 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB13Q9Y5F0 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB13Q9Y5F0 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB13Q9Y5F0 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB13Q9Y5F0 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB13Q9Y5F0 INGX-201ENST00000359239 846 ntBASIC20.62■□□□□ 0.89
PCDHB13Q9Y5F0 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB13Q9Y5F0 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.62■□□□□ 0.89
PCDHB13Q9Y5F0 AC092473.1-201ENST00000441098 221 ntBASIC20.62■□□□□ 0.89
PCDHB13Q9Y5F0 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB13Q9Y5F0 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB13Q9Y5F0 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB13Q9Y5F0 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.62■□□□□ 0.89
PCDHB13Q9Y5F0 MIR4674-201ENST00000582457 87 ntBASIC20.62■□□□□ 0.89
PCDHB13Q9Y5F0 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.62■□□□□ 0.89
PCDHB13Q9Y5F0 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB13Q9Y5F0 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB13Q9Y5F0 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB13Q9Y5F0 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PCDHB13Q9Y5F0 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHB13Q9Y5F0 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB13Q9Y5F0 ANO7L1-203ENST00000602586 1720 ntBASIC20.61■□□□□ 0.89
PCDHB13Q9Y5F0 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB13Q9Y5F0 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHB13Q9Y5F0 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB13Q9Y5F0 KRT18P22-201ENST00000402024 1347 ntBASIC20.61■□□□□ 0.89
PCDHB13Q9Y5F0 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB13Q9Y5F0 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.61■□□□□ 0.89
PCDHB13Q9Y5F0 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms