Protein–RNA interactions for Protein: Q9Y223

GNE, Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase, humanhuman

Known RBP Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GNEQ9Y223 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.83■□□□□ 0.93
GNEQ9Y223 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.83■□□□□ 0.93
GNEQ9Y223 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
GNEQ9Y223 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
GNEQ9Y223 IGHGP-201ENST00000390555 1178 ntBASIC20.83■□□□□ 0.93
GNEQ9Y223 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.83■□□□□ 0.93
GNEQ9Y223 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
GNEQ9Y223 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
GNEQ9Y223 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
GNEQ9Y223 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.83■□□□□ 0.92
GNEQ9Y223 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
GNEQ9Y223 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
GNEQ9Y223 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
GNEQ9Y223 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
GNEQ9Y223 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.83■□□□□ 0.92
GNEQ9Y223 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.83■□□□□ 0.92
GNEQ9Y223 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
GNEQ9Y223 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.92
GNEQ9Y223 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GNEQ9Y223 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
GNEQ9Y223 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.82■□□□□ 0.92
GNEQ9Y223 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GNEQ9Y223 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
GNEQ9Y223 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
GNEQ9Y223 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GNEQ9Y223 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.82■□□□□ 0.92
GNEQ9Y223 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
GNEQ9Y223 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GNEQ9Y223 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GNEQ9Y223 AC104819.1-201ENST00000504587 486 ntBASIC20.82■□□□□ 0.92
GNEQ9Y223 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC20.82■□□□□ 0.92
GNEQ9Y223 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.82■□□□□ 0.92
GNEQ9Y223 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
GNEQ9Y223 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC20.82■□□□□ 0.92
GNEQ9Y223 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.82■□□□□ 0.92
GNEQ9Y223 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.82■□□□□ 0.92
GNEQ9Y223 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
GNEQ9Y223 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GNEQ9Y223 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
GNEQ9Y223 FP475955.4-201ENST00000623131 1990 ntBASIC20.82■□□□□ 0.92
GNEQ9Y223 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.82■□□□□ 0.92
GNEQ9Y223 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.82■□□□□ 0.92
GNEQ9Y223 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GNEQ9Y223 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GNEQ9Y223 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.82■□□□□ 0.92
GNEQ9Y223 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
GNEQ9Y223 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GNEQ9Y223 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
GNEQ9Y223 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
GNEQ9Y223 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.81■□□□□ 0.92
GNEQ9Y223 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
GNEQ9Y223 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.81■□□□□ 0.92
GNEQ9Y223 AC141586.3-201ENST00000562166 1838 ntBASIC20.81■□□□□ 0.92
GNEQ9Y223 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
GNEQ9Y223 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.81■□□□□ 0.92
GNEQ9Y223 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GNEQ9Y223 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GNEQ9Y223 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
GNEQ9Y223 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
GNEQ9Y223 RN7SL606P-201ENST00000472779 293 ntBASIC20.81■□□□□ 0.92
GNEQ9Y223 AC074051.2-201ENST00000565115 352 ntBASIC20.81■□□□□ 0.92
GNEQ9Y223 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
GNEQ9Y223 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
GNEQ9Y223 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.81■□□□□ 0.92
GNEQ9Y223 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.81■□□□□ 0.92
GNEQ9Y223 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GNEQ9Y223 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GNEQ9Y223 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
GNEQ9Y223 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.81■□□□□ 0.92
GNEQ9Y223 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.81■□□□□ 0.92
GNEQ9Y223 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.81■□□□□ 0.92
GNEQ9Y223 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GNEQ9Y223 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GNEQ9Y223 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.81■□□□□ 0.92
GNEQ9Y223 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.8■□□□□ 0.92
GNEQ9Y223 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GNEQ9Y223 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.8■□□□□ 0.92
GNEQ9Y223 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
GNEQ9Y223 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GNEQ9Y223 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.8■□□□□ 0.92
GNEQ9Y223 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GNEQ9Y223 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
GNEQ9Y223 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GNEQ9Y223 IGHV3-47-201ENST00000425060 335 ntBASIC20.8■□□□□ 0.92
GNEQ9Y223 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
GNEQ9Y223 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.8■□□□□ 0.92
GNEQ9Y223 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.8■□□□□ 0.92
GNEQ9Y223 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.8■□□□□ 0.92
GNEQ9Y223 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GNEQ9Y223 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
GNEQ9Y223 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.8■□□□□ 0.92
GNEQ9Y223 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GNEQ9Y223 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
GNEQ9Y223 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
GNEQ9Y223 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.8■□□□□ 0.92
GNEQ9Y223 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
GNEQ9Y223 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
GNEQ9Y223 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
GNEQ9Y223 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
GNEQ9Y223 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms