Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC26.76■■□□□ 1.87
SLC52A1Q9NWF4 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC26.76■■□□□ 1.87
SLC52A1Q9NWF4 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
SLC52A1Q9NWF4 FAM197Y8-203ENST00000450145 560 ntBASIC26.76■■□□□ 1.87
SLC52A1Q9NWF4 AC139530.3-201ENST00000620344 690 ntBASIC26.76■■□□□ 1.87
SLC52A1Q9NWF4 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.87
SLC52A1Q9NWF4 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
SLC52A1Q9NWF4 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
SLC52A1Q9NWF4 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
SLC52A1Q9NWF4 CCS-201ENST00000310190 942 ntTSL 5 BASIC26.75■■□□□ 1.87
SLC52A1Q9NWF4 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
SLC52A1Q9NWF4 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
SLC52A1Q9NWF4 KRT18P67-201ENST00000432816 1264 ntBASIC26.75■■□□□ 1.87
SLC52A1Q9NWF4 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC26.75■■□□□ 1.87
SLC52A1Q9NWF4 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
SLC52A1Q9NWF4 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC26.75■■□□□ 1.87
SLC52A1Q9NWF4 MOK-208ENST00000519058 917 ntTSL 2 BASIC26.75■■□□□ 1.87
SLC52A1Q9NWF4 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
SLC52A1Q9NWF4 MIR5100-201ENST00000579544 119 ntBASIC26.75■■□□□ 1.87
SLC52A1Q9NWF4 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
SLC52A1Q9NWF4 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC26.75■■□□□ 1.87
SLC52A1Q9NWF4 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC26.75■■□□□ 1.87
SLC52A1Q9NWF4 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
SLC52A1Q9NWF4 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
SLC52A1Q9NWF4 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC26.75■■□□□ 1.87
SLC52A1Q9NWF4 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
SLC52A1Q9NWF4 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
SLC52A1Q9NWF4 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC26.75■■□□□ 1.87
SLC52A1Q9NWF4 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
SLC52A1Q9NWF4 KRT8P50-201ENST00000562022 1438 ntBASIC26.74■■□□□ 1.87
SLC52A1Q9NWF4 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SLC52A1Q9NWF4 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC26.74■■□□□ 1.87
SLC52A1Q9NWF4 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SLC52A1Q9NWF4 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SLC52A1Q9NWF4 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SLC52A1Q9NWF4 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SLC52A1Q9NWF4 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC26.74■■□□□ 1.87
SLC52A1Q9NWF4 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
SLC52A1Q9NWF4 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC26.74■■□□□ 1.87
SLC52A1Q9NWF4 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SLC52A1Q9NWF4 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
SLC52A1Q9NWF4 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC26.74■■□□□ 1.87
SLC52A1Q9NWF4 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
SLC52A1Q9NWF4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SLC52A1Q9NWF4 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SLC52A1Q9NWF4 Z98044.1-201ENST00000632503 1764 ntBASIC26.74■■□□□ 1.87
SLC52A1Q9NWF4 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SLC52A1Q9NWF4 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC26.73■■□□□ 1.87
SLC52A1Q9NWF4 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SLC52A1Q9NWF4 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SLC52A1Q9NWF4 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC26.73■■□□□ 1.87
SLC52A1Q9NWF4 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC26.73■■□□□ 1.87
SLC52A1Q9NWF4 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SLC52A1Q9NWF4 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC26.73■■□□□ 1.87
SLC52A1Q9NWF4 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
SLC52A1Q9NWF4 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC26.73■■□□□ 1.87
SLC52A1Q9NWF4 AL031284.1-201ENST00000419297 478 ntBASIC26.73■■□□□ 1.87
SLC52A1Q9NWF4 KRT18P41-201ENST00000518924 1277 ntBASIC26.73■■□□□ 1.87
SLC52A1Q9NWF4 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC26.73■■□□□ 1.87
SLC52A1Q9NWF4 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC26.73■■□□□ 1.87
SLC52A1Q9NWF4 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC26.73■■□□□ 1.87
SLC52A1Q9NWF4 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
SLC52A1Q9NWF4 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC26.73■■□□□ 1.87
SLC52A1Q9NWF4 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SLC52A1Q9NWF4 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC26.72■■□□□ 1.87
SLC52A1Q9NWF4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
SLC52A1Q9NWF4 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SLC52A1Q9NWF4 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
SLC52A1Q9NWF4 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC26.72■■□□□ 1.87
SLC52A1Q9NWF4 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SLC52A1Q9NWF4 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SLC52A1Q9NWF4 MED22-202ENST00000371999 987 ntTSL 3 BASIC26.72■■□□□ 1.87
SLC52A1Q9NWF4 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC26.72■■□□□ 1.87
SLC52A1Q9NWF4 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC26.72■■□□□ 1.87
SLC52A1Q9NWF4 SLC25A1P1-201ENST00000528351 927 ntBASIC26.72■■□□□ 1.87
SLC52A1Q9NWF4 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC26.72■■□□□ 1.87
SLC52A1Q9NWF4 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
SLC52A1Q9NWF4 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC26.72■■□□□ 1.87
SLC52A1Q9NWF4 AL591684.3-201ENST00000605187 298 ntBASIC26.72■■□□□ 1.87
SLC52A1Q9NWF4 AC114341.1-201ENST00000618070 349 ntBASIC26.72■■□□□ 1.87
SLC52A1Q9NWF4 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SLC52A1Q9NWF4 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC26.72■■□□□ 1.87
SLC52A1Q9NWF4 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
SLC52A1Q9NWF4 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC26.72■■□□□ 1.87
SLC52A1Q9NWF4 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
SLC52A1Q9NWF4 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC26.72■■□□□ 1.87
SLC52A1Q9NWF4 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC26.71■■□□□ 1.87
SLC52A1Q9NWF4 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
SLC52A1Q9NWF4 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC26.71■■□□□ 1.87
SLC52A1Q9NWF4 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SLC52A1Q9NWF4 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SLC52A1Q9NWF4 DDT-203ENST00000403754 569 ntTSL 3 BASIC26.71■■□□□ 1.87
SLC52A1Q9NWF4 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC26.71■■□□□ 1.87
SLC52A1Q9NWF4 DDT-206ENST00000430101 573 ntTSL 2 BASIC26.71■■□□□ 1.87
SLC52A1Q9NWF4 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
SLC52A1Q9NWF4 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC26.71■■□□□ 1.87
SLC52A1Q9NWF4 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC26.71■■□□□ 1.87
SLC52A1Q9NWF4 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SLC52A1Q9NWF4 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC26.71■■□□□ 1.87
SLC52A1Q9NWF4 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC26.71■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms