Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 MIR6786-201ENST00000616843 113 ntBASIC17.69■□□□□ 0.42
NEUROD4Q9HD90 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NEUROD4Q9HD90 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.69■□□□□ 0.42
NEUROD4Q9HD90 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NEUROD4Q9HD90 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
NEUROD4Q9HD90 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NEUROD4Q9HD90 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.69■□□□□ 0.42
NEUROD4Q9HD90 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.69■□□□□ 0.42
NEUROD4Q9HD90 FSCN1P1-201ENST00000568912 1481 ntBASIC17.69■□□□□ 0.42
NEUROD4Q9HD90 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NEUROD4Q9HD90 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
NEUROD4Q9HD90 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
NEUROD4Q9HD90 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.68■□□□□ 0.42
NEUROD4Q9HD90 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.68■□□□□ 0.42
NEUROD4Q9HD90 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.68■□□□□ 0.42
NEUROD4Q9HD90 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NEUROD4Q9HD90 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NEUROD4Q9HD90 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NEUROD4Q9HD90 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
NEUROD4Q9HD90 B3GAT3P1-201ENST00000471720 806 ntBASIC17.68■□□□□ 0.42
NEUROD4Q9HD90 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.68■□□□□ 0.42
NEUROD4Q9HD90 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NEUROD4Q9HD90 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.68■□□□□ 0.42
NEUROD4Q9HD90 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.68■□□□□ 0.42
NEUROD4Q9HD90 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
NEUROD4Q9HD90 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
NEUROD4Q9HD90 AC130371.2-201ENST00000619443 611 ntBASIC17.68■□□□□ 0.42
NEUROD4Q9HD90 MYC-208ENST00000641036 567 ntBASIC17.68■□□□□ 0.42
NEUROD4Q9HD90 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NEUROD4Q9HD90 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
NEUROD4Q9HD90 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
NEUROD4Q9HD90 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NEUROD4Q9HD90 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NEUROD4Q9HD90 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NEUROD4Q9HD90 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NEUROD4Q9HD90 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
NEUROD4Q9HD90 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.67■□□□□ 0.42
NEUROD4Q9HD90 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NEUROD4Q9HD90 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.67■□□□□ 0.42
NEUROD4Q9HD90 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NEUROD4Q9HD90 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.67■□□□□ 0.42
NEUROD4Q9HD90 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.67■□□□□ 0.42
NEUROD4Q9HD90 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
NEUROD4Q9HD90 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NEUROD4Q9HD90 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NEUROD4Q9HD90 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NEUROD4Q9HD90 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.67■□□□□ 0.42
NEUROD4Q9HD90 LINC01023-201ENST00000606054 436 ntBASIC17.67■□□□□ 0.42
NEUROD4Q9HD90 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.67■□□□□ 0.42
NEUROD4Q9HD90 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.67■□□□□ 0.42
NEUROD4Q9HD90 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.67■□□□□ 0.42
NEUROD4Q9HD90 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
NEUROD4Q9HD90 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.67■□□□□ 0.42
NEUROD4Q9HD90 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.67■□□□□ 0.42
NEUROD4Q9HD90 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.67■□□□□ 0.42
NEUROD4Q9HD90 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.67■□□□□ 0.42
NEUROD4Q9HD90 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.67■□□□□ 0.42
NEUROD4Q9HD90 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
NEUROD4Q9HD90 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NEUROD4Q9HD90 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NEUROD4Q9HD90 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.67■□□□□ 0.42
NEUROD4Q9HD90 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
NEUROD4Q9HD90 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NEUROD4Q9HD90 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NEUROD4Q9HD90 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NEUROD4Q9HD90 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.66■□□□□ 0.42
NEUROD4Q9HD90 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.66■□□□□ 0.42
NEUROD4Q9HD90 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.66■□□□□ 0.42
NEUROD4Q9HD90 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
NEUROD4Q9HD90 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NEUROD4Q9HD90 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NEUROD4Q9HD90 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NEUROD4Q9HD90 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NEUROD4Q9HD90 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NEUROD4Q9HD90 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
NEUROD4Q9HD90 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
NEUROD4Q9HD90 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NEUROD4Q9HD90 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.66■□□□□ 0.42
NEUROD4Q9HD90 AC211429.1-201ENST00000415277 523 ntBASIC17.66■□□□□ 0.42
NEUROD4Q9HD90 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NEUROD4Q9HD90 SNORA78-201ENST00000459373 127 ntBASIC17.66■□□□□ 0.42
NEUROD4Q9HD90 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NEUROD4Q9HD90 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.66■□□□□ 0.42
NEUROD4Q9HD90 DGCR10-201ENST00000609839 495 ntBASIC17.66■□□□□ 0.42
NEUROD4Q9HD90 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NEUROD4Q9HD90 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.66■□□□□ 0.42
NEUROD4Q9HD90 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NEUROD4Q9HD90 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NEUROD4Q9HD90 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.66■□□□□ 0.42
NEUROD4Q9HD90 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.66■□□□□ 0.42
NEUROD4Q9HD90 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
NEUROD4Q9HD90 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
NEUROD4Q9HD90 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NEUROD4Q9HD90 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NEUROD4Q9HD90 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NEUROD4Q9HD90 AC135050.7-201ENST00000624508 2218 ntBASIC17.66■□□□□ 0.42
NEUROD4Q9HD90 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NEUROD4Q9HD90 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.65■□□□□ 0.42
NEUROD4Q9HD90 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
NEUROD4Q9HD90 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms