Protein–RNA interactions for Protein: Q9H9D4

ZNF408, Zinc finger protein 408, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF408Q9H9D4 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ZNF408Q9H9D4 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ZNF408Q9H9D4 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
ZNF408Q9H9D4 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ZNF408Q9H9D4 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.95■■□□□ 1.1
ZNF408Q9H9D4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
ZNF408Q9H9D4 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ZNF408Q9H9D4 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.95■■□□□ 1.1
ZNF408Q9H9D4 HNRNPDP1-201ENST00000439535 754 ntBASIC21.95■■□□□ 1.1
ZNF408Q9H9D4 PGAM5P1-201ENST00000518923 814 ntBASIC21.95■■□□□ 1.1
ZNF408Q9H9D4 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC21.95■■□□□ 1.1
ZNF408Q9H9D4 AC140113.2-201ENST00000604370 208 ntBASIC21.95■■□□□ 1.1
ZNF408Q9H9D4 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
ZNF408Q9H9D4 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ZNF408Q9H9D4 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
ZNF408Q9H9D4 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
ZNF408Q9H9D4 AC104109.2-201ENST00000602919 1418 ntBASIC21.95■■□□□ 1.1
ZNF408Q9H9D4 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC21.95■■□□□ 1.1
ZNF408Q9H9D4 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ZNF408Q9H9D4 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
ZNF408Q9H9D4 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ZNF408Q9H9D4 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.94■■□□□ 1.1
ZNF408Q9H9D4 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.94■■□□□ 1.1
ZNF408Q9H9D4 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
ZNF408Q9H9D4 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
ZNF408Q9H9D4 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
ZNF408Q9H9D4 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ZNF408Q9H9D4 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC21.94■■□□□ 1.1
ZNF408Q9H9D4 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC21.94■■□□□ 1.1
ZNF408Q9H9D4 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC21.94■■□□□ 1.1
ZNF408Q9H9D4 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC21.94■■□□□ 1.1
ZNF408Q9H9D4 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ZNF408Q9H9D4 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
ZNF408Q9H9D4 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
ZNF408Q9H9D4 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ZNF408Q9H9D4 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC21.94■■□□□ 1.1
ZNF408Q9H9D4 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.94■■□□□ 1.1
ZNF408Q9H9D4 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ZNF408Q9H9D4 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ZNF408Q9H9D4 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.94■■□□□ 1.1
ZNF408Q9H9D4 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.94■■□□□ 1.1
ZNF408Q9H9D4 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ZNF408Q9H9D4 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ZNF408Q9H9D4 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ZNF408Q9H9D4 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ZNF408Q9H9D4 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
ZNF408Q9H9D4 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
ZNF408Q9H9D4 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
ZNF408Q9H9D4 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ZNF408Q9H9D4 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
ZNF408Q9H9D4 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
ZNF408Q9H9D4 UPF3AP3-201ENST00000420996 769 ntBASIC21.93■■□□□ 1.1
ZNF408Q9H9D4 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC21.93■■□□□ 1.1
ZNF408Q9H9D4 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
ZNF408Q9H9D4 SCARNA2-201ENST00000458748 420 ntBASIC21.93■■□□□ 1.1
ZNF408Q9H9D4 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC21.93■■□□□ 1.1
ZNF408Q9H9D4 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
ZNF408Q9H9D4 AC073314.1-201ENST00000568729 2216 ntBASIC21.93■■□□□ 1.1
ZNF408Q9H9D4 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC21.93■■□□□ 1.1
ZNF408Q9H9D4 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC21.93■■□□□ 1.1
ZNF408Q9H9D4 AL356488.2-201ENST00000602755 427 ntBASIC21.93■■□□□ 1.1
ZNF408Q9H9D4 AL512353.2-201ENST00000448759 1962 ntBASIC21.92■■□□□ 1.1
ZNF408Q9H9D4 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ZNF408Q9H9D4 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.92■■□□□ 1.1
ZNF408Q9H9D4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ZNF408Q9H9D4 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC21.92■■□□□ 1.1
ZNF408Q9H9D4 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ZNF408Q9H9D4 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ZNF408Q9H9D4 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
ZNF408Q9H9D4 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ZNF408Q9H9D4 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ZNF408Q9H9D4 HES2-202ENST00000377836 507 ntTSL 2 BASIC21.92■■□□□ 1.1
ZNF408Q9H9D4 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ZNF408Q9H9D4 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ZNF408Q9H9D4 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC21.92■■□□□ 1.1
ZNF408Q9H9D4 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC21.92■■□□□ 1.1
ZNF408Q9H9D4 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC21.92■■□□□ 1.1
ZNF408Q9H9D4 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ZNF408Q9H9D4 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
ZNF408Q9H9D4 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
ZNF408Q9H9D4 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ZNF408Q9H9D4 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
ZNF408Q9H9D4 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ZNF408Q9H9D4 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
ZNF408Q9H9D4 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
ZNF408Q9H9D4 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
ZNF408Q9H9D4 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
ZNF408Q9H9D4 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ZNF408Q9H9D4 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ZNF408Q9H9D4 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
ZNF408Q9H9D4 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
ZNF408Q9H9D4 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ZNF408Q9H9D4 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ZNF408Q9H9D4 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC21.91■■□□□ 1.1
ZNF408Q9H9D4 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ZNF408Q9H9D4 MED15P5-201ENST00000423150 992 ntBASIC21.91■■□□□ 1.1
ZNF408Q9H9D4 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC21.91■■□□□ 1.1
ZNF408Q9H9D4 AP001160.2-201ENST00000596071 487 ntBASIC21.91■■□□□ 1.1
ZNF408Q9H9D4 AC114341.1-201ENST00000618070 349 ntBASIC21.91■■□□□ 1.1
ZNF408Q9H9D4 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms