Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.76■□□□□ 0.91
RNF39Q9H2S5 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RNF39Q9H2S5 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.75■□□□□ 0.91
RNF39Q9H2S5 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.75■□□□□ 0.91
RNF39Q9H2S5 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF39Q9H2S5 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
RNF39Q9H2S5 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RNF39Q9H2S5 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
RNF39Q9H2S5 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF39Q9H2S5 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF39Q9H2S5 AK4P3-201ENST00000418260 669 ntBASIC20.75■□□□□ 0.91
RNF39Q9H2S5 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC20.75■□□□□ 0.91
RNF39Q9H2S5 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.75■□□□□ 0.91
RNF39Q9H2S5 CSTF3-203ENST00000438862 1132 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RNF39Q9H2S5 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.75■□□□□ 0.91
RNF39Q9H2S5 GXYLT1P1-201ENST00000446657 490 ntBASIC20.75■□□□□ 0.91
RNF39Q9H2S5 AC069277.2-201ENST00000454211 432 ntBASIC20.75■□□□□ 0.91
RNF39Q9H2S5 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF39Q9H2S5 PRSS44-201ENST00000515154 1146 ntBASIC20.75■□□□□ 0.91
RNF39Q9H2S5 MEG8-217ENST00000556637 924 ntTSL 5 BASIC20.75■□□□□ 0.91
RNF39Q9H2S5 LINC01571-201ENST00000563603 811 ntTSL 2 BASIC20.75■□□□□ 0.91
RNF39Q9H2S5 AC022919.1-201ENST00000624979 626 ntBASIC20.75■□□□□ 0.91
RNF39Q9H2S5 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF39Q9H2S5 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF39Q9H2S5 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF39Q9H2S5 PLSCR2-205ENST00000497985 1441 ntTSL 2 BASIC20.75■□□□□ 0.91
RNF39Q9H2S5 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.75■□□□□ 0.91
RNF39Q9H2S5 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RNF39Q9H2S5 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.75■□□□□ 0.91
RNF39Q9H2S5 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RNF39Q9H2S5 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.75■□□□□ 0.91
RNF39Q9H2S5 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
RNF39Q9H2S5 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RNF39Q9H2S5 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
RNF39Q9H2S5 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF39Q9H2S5 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF39Q9H2S5 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF39Q9H2S5 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.75■□□□□ 0.91
RNF39Q9H2S5 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF39Q9H2S5 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF39Q9H2S5 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF39Q9H2S5 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.74■□□□□ 0.91
RNF39Q9H2S5 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF39Q9H2S5 TTC32-201ENST00000333610 822 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF39Q9H2S5 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF39Q9H2S5 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.74■□□□□ 0.91
RNF39Q9H2S5 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF39Q9H2S5 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF39Q9H2S5 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.74■□□□□ 0.91
RNF39Q9H2S5 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.74■□□□□ 0.91
RNF39Q9H2S5 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF39Q9H2S5 TSPY23P-201ENST00000440136 739 ntBASIC20.74■□□□□ 0.91
RNF39Q9H2S5 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
RNF39Q9H2S5 MTND1P5-201ENST00000517906 940 ntBASIC20.74■□□□□ 0.91
RNF39Q9H2S5 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.74■□□□□ 0.91
RNF39Q9H2S5 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.74■□□□□ 0.91
RNF39Q9H2S5 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.74■□□□□ 0.91
RNF39Q9H2S5 AL023583.1-201ENST00000607518 1143 ntBASIC20.74■□□□□ 0.91
RNF39Q9H2S5 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
RNF39Q9H2S5 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC20.74■□□□□ 0.91
RNF39Q9H2S5 AL031430.1-201ENST00000642067 1039 ntBASIC20.74■□□□□ 0.91
RNF39Q9H2S5 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF39Q9H2S5 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF39Q9H2S5 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF39Q9H2S5 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.74■□□□□ 0.91
RNF39Q9H2S5 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF39Q9H2S5 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.74■□□□□ 0.91
RNF39Q9H2S5 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF39Q9H2S5 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.73■□□□□ 0.91
RNF39Q9H2S5 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.73■□□□□ 0.91
RNF39Q9H2S5 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.73■□□□□ 0.91
RNF39Q9H2S5 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.73■□□□□ 0.91
RNF39Q9H2S5 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.73■□□□□ 0.91
RNF39Q9H2S5 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF39Q9H2S5 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF39Q9H2S5 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF39Q9H2S5 NPM1P31-201ENST00000399021 764 ntBASIC20.73■□□□□ 0.91
RNF39Q9H2S5 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.73■□□□□ 0.91
RNF39Q9H2S5 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC20.73■□□□□ 0.91
RNF39Q9H2S5 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.73■□□□□ 0.91
RNF39Q9H2S5 MTND1P6-201ENST00000523621 946 ntBASIC20.73■□□□□ 0.91
RNF39Q9H2S5 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC20.73■□□□□ 0.91
RNF39Q9H2S5 MYL12A-207ENST00000579226 947 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
RNF39Q9H2S5 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.73■□□□□ 0.91
RNF39Q9H2S5 AC003991.1-203ENST00000591739 719 ntTSL 5 BASIC20.73■□□□□ 0.91
RNF39Q9H2S5 AC091057.2-201ENST00000602594 792 ntBASIC20.73■□□□□ 0.91
RNF39Q9H2S5 AC141257.4-201ENST00000634557 245 ntBASIC20.73■□□□□ 0.91
RNF39Q9H2S5 AC136944.6-201ENST00000634818 245 ntBASIC20.73■□□□□ 0.91
RNF39Q9H2S5 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF39Q9H2S5 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.73■□□□□ 0.91
RNF39Q9H2S5 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RNF39Q9H2S5 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF39Q9H2S5 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF39Q9H2S5 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF39Q9H2S5 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF39Q9H2S5 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF39Q9H2S5 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.72■□□□□ 0.91
RNF39Q9H2S5 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
RNF39Q9H2S5 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF39Q9H2S5 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms