Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 AL023284.2-201ENST00000405850 579 ntBASIC20.72■□□□□ 0.91
CCDC113Q9H0I3 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC113Q9H0I3 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC113Q9H0I3 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CCDC113Q9H0I3 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC113Q9H0I3 AC141257.4-201ENST00000634557 245 ntBASIC20.72■□□□□ 0.91
CCDC113Q9H0I3 AC136944.6-201ENST00000634818 245 ntBASIC20.72■□□□□ 0.91
CCDC113Q9H0I3 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC113Q9H0I3 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
CCDC113Q9H0I3 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC113Q9H0I3 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CCDC113Q9H0I3 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC113Q9H0I3 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC113Q9H0I3 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC113Q9H0I3 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CCDC113Q9H0I3 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC113Q9H0I3 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CCDC113Q9H0I3 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC113Q9H0I3 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.71■□□□□ 0.91
CCDC113Q9H0I3 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC113Q9H0I3 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CCDC113Q9H0I3 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC113Q9H0I3 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CCDC113Q9H0I3 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC113Q9H0I3 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.71■□□□□ 0.91
CCDC113Q9H0I3 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC113Q9H0I3 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CCDC113Q9H0I3 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC113Q9H0I3 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC113Q9H0I3 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC113Q9H0I3 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.71■□□□□ 0.91
CCDC113Q9H0I3 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC113Q9H0I3 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC113Q9H0I3 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC113Q9H0I3 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CCDC113Q9H0I3 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC113Q9H0I3 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.71■□□□□ 0.91
CCDC113Q9H0I3 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC113Q9H0I3 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC113Q9H0I3 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CCDC113Q9H0I3 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC113Q9H0I3 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC113Q9H0I3 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC113Q9H0I3 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC113Q9H0I3 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC113Q9H0I3 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC113Q9H0I3 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC113Q9H0I3 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CCDC113Q9H0I3 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC113Q9H0I3 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC113Q9H0I3 AC117947.1-201ENST00000427448 529 ntBASIC20.7■□□□□ 0.9
CCDC113Q9H0I3 BX664615.1-201ENST00000443558 458 ntBASIC20.7■□□□□ 0.9
CCDC113Q9H0I3 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC113Q9H0I3 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CCDC113Q9H0I3 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC113Q9H0I3 AL512604.3-201ENST00000569583 964 ntBASIC20.7■□□□□ 0.9
CCDC113Q9H0I3 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC113Q9H0I3 CR769767.2-201ENST00000622735 460 ntBASIC20.7■□□□□ 0.9
CCDC113Q9H0I3 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC113Q9H0I3 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC113Q9H0I3 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CCDC113Q9H0I3 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC113Q9H0I3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC113Q9H0I3 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC113Q9H0I3 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC113Q9H0I3 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC113Q9H0I3 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC113Q9H0I3 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC113Q9H0I3 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC113Q9H0I3 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC113Q9H0I3 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC113Q9H0I3 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC113Q9H0I3 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC113Q9H0I3 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC113Q9H0I3 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC113Q9H0I3 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
CCDC113Q9H0I3 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC113Q9H0I3 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC113Q9H0I3 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC113Q9H0I3 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC113Q9H0I3 MIR1224-201ENST00000408193 85 ntBASIC20.69■□□□□ 0.9
CCDC113Q9H0I3 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC113Q9H0I3 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC113Q9H0I3 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC113Q9H0I3 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC113Q9H0I3 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC113Q9H0I3 AC010331.1-201ENST00000611423 582 ntBASIC20.69■□□□□ 0.9
CCDC113Q9H0I3 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC113Q9H0I3 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
CCDC113Q9H0I3 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC113Q9H0I3 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC113Q9H0I3 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC113Q9H0I3 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC113Q9H0I3 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC113Q9H0I3 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
CCDC113Q9H0I3 AL512353.2-201ENST00000448759 1962 ntBASIC20.68■□□□□ 0.9
CCDC113Q9H0I3 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC113Q9H0I3 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CCDC113Q9H0I3 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC113Q9H0I3 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms