Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBE2OQ9C0C9 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBE2OQ9C0C9 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBE2OQ9C0C9 IGHV3-47-201ENST00000425060 335 ntBASIC20.59■□□□□ 0.89
UBE2OQ9C0C9 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC20.59■□□□□ 0.89
UBE2OQ9C0C9 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC20.59■□□□□ 0.89
UBE2OQ9C0C9 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
UBE2OQ9C0C9 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
UBE2OQ9C0C9 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC20.59■□□□□ 0.89
UBE2OQ9C0C9 MIR3917-201ENST00000580971 93 ntBASIC20.59■□□□□ 0.89
UBE2OQ9C0C9 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.59■□□□□ 0.89
UBE2OQ9C0C9 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.59■□□□□ 0.89
UBE2OQ9C0C9 AC055717.3-201ENST00000622967 595 ntBASIC20.59■□□□□ 0.89
UBE2OQ9C0C9 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
UBE2OQ9C0C9 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
UBE2OQ9C0C9 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBE2OQ9C0C9 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
UBE2OQ9C0C9 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.59■□□□□ 0.89
UBE2OQ9C0C9 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBE2OQ9C0C9 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBE2OQ9C0C9 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
UBE2OQ9C0C9 ZNF259P1-201ENST00000407656 1365 ntBASIC20.59■□□□□ 0.89
UBE2OQ9C0C9 AC243591.1-201ENST00000452967 1364 ntBASIC20.59■□□□□ 0.89
UBE2OQ9C0C9 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
UBE2OQ9C0C9 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
UBE2OQ9C0C9 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
UBE2OQ9C0C9 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
UBE2OQ9C0C9 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
UBE2OQ9C0C9 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
UBE2OQ9C0C9 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.58■□□□□ 0.89
UBE2OQ9C0C9 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
UBE2OQ9C0C9 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
UBE2OQ9C0C9 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
UBE2OQ9C0C9 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
UBE2OQ9C0C9 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.58■□□□□ 0.89
UBE2OQ9C0C9 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
UBE2OQ9C0C9 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
UBE2OQ9C0C9 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
UBE2OQ9C0C9 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
UBE2OQ9C0C9 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
UBE2OQ9C0C9 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
UBE2OQ9C0C9 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.58■□□□□ 0.89
UBE2OQ9C0C9 AC009065.1-201ENST00000564055 1225 ntBASIC20.58■□□□□ 0.89
UBE2OQ9C0C9 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.58■□□□□ 0.89
UBE2OQ9C0C9 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
UBE2OQ9C0C9 AC005332.3-201ENST00000589904 676 ntBASIC20.58■□□□□ 0.89
UBE2OQ9C0C9 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.58■□□□□ 0.89
UBE2OQ9C0C9 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.58■□□□□ 0.89
UBE2OQ9C0C9 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.89
UBE2OQ9C0C9 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.58■□□□□ 0.88
UBE2OQ9C0C9 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.58■□□□□ 0.88
UBE2OQ9C0C9 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
UBE2OQ9C0C9 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.58■□□□□ 0.88
UBE2OQ9C0C9 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
UBE2OQ9C0C9 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
UBE2OQ9C0C9 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.57■□□□□ 0.88
UBE2OQ9C0C9 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
UBE2OQ9C0C9 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.57■□□□□ 0.88
UBE2OQ9C0C9 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
UBE2OQ9C0C9 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC20.57■□□□□ 0.88
UBE2OQ9C0C9 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.57■□□□□ 0.88
UBE2OQ9C0C9 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.57■□□□□ 0.88
UBE2OQ9C0C9 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.57■□□□□ 0.88
UBE2OQ9C0C9 AP001271.2-201ENST00000624018 1556 ntBASIC20.57■□□□□ 0.88
UBE2OQ9C0C9 AC148477.8-201ENST00000624298 468 ntBASIC20.57■□□□□ 0.88
UBE2OQ9C0C9 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBE2OQ9C0C9 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBE2OQ9C0C9 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
UBE2OQ9C0C9 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBE2OQ9C0C9 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
UBE2OQ9C0C9 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
UBE2OQ9C0C9 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBE2OQ9C0C9 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.56■□□□□ 0.88
UBE2OQ9C0C9 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBE2OQ9C0C9 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBE2OQ9C0C9 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
UBE2OQ9C0C9 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
UBE2OQ9C0C9 HNRNPA1P28-201ENST00000424481 961 ntBASIC20.56■□□□□ 0.88
UBE2OQ9C0C9 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
UBE2OQ9C0C9 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
UBE2OQ9C0C9 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBE2OQ9C0C9 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.56■□□□□ 0.88
UBE2OQ9C0C9 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.56■□□□□ 0.88
UBE2OQ9C0C9 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
UBE2OQ9C0C9 AC112497.1-201ENST00000624824 639 ntBASIC20.56■□□□□ 0.88
UBE2OQ9C0C9 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.56■□□□□ 0.88
UBE2OQ9C0C9 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBE2OQ9C0C9 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
UBE2OQ9C0C9 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBE2OQ9C0C9 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
UBE2OQ9C0C9 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBE2OQ9C0C9 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.56■□□□□ 0.88
UBE2OQ9C0C9 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.56■□□□□ 0.88
UBE2OQ9C0C9 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBE2OQ9C0C9 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.56■□□□□ 0.88
UBE2OQ9C0C9 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.56■□□□□ 0.88
UBE2OQ9C0C9 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBE2OQ9C0C9 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.56■□□□□ 0.88
UBE2OQ9C0C9 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBE2OQ9C0C9 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms