Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PCDH11YQ9BZA8 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC24.26■■□□□ 1.47
PCDH11YQ9BZA8 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDH11YQ9BZA8 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDH11YQ9BZA8 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDH11YQ9BZA8 AC141586.3-201ENST00000562166 1838 ntBASIC24.26■■□□□ 1.47
PCDH11YQ9BZA8 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PCDH11YQ9BZA8 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDH11YQ9BZA8 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC24.25■■□□□ 1.47
PCDH11YQ9BZA8 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PCDH11YQ9BZA8 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDH11YQ9BZA8 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PCDH11YQ9BZA8 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDH11YQ9BZA8 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
PCDH11YQ9BZA8 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDH11YQ9BZA8 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDH11YQ9BZA8 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC24.25■■□□□ 1.47
PCDH11YQ9BZA8 PENK-208ENST00000523051 772 ntTSL 5 BASIC24.25■■□□□ 1.47
PCDH11YQ9BZA8 ABR-217ENST00000572441 563 ntTSL 4 BASIC24.25■■□□□ 1.47
PCDH11YQ9BZA8 IGHV3OR16-7-201ENST00000604106 360 ntBASIC24.25■■□□□ 1.47
PCDH11YQ9BZA8 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDH11YQ9BZA8 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDH11YQ9BZA8 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PCDH11YQ9BZA8 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDH11YQ9BZA8 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC24.25■■□□□ 1.47
PCDH11YQ9BZA8 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PCDH11YQ9BZA8 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC24.24■■□□□ 1.47
PCDH11YQ9BZA8 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDH11YQ9BZA8 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC24.24■■□□□ 1.47
PCDH11YQ9BZA8 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDH11YQ9BZA8 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDH11YQ9BZA8 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC24.24■■□□□ 1.47
PCDH11YQ9BZA8 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
PCDH11YQ9BZA8 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDH11YQ9BZA8 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDH11YQ9BZA8 Z98044.1-201ENST00000632503 1764 ntBASIC24.24■■□□□ 1.47
PCDH11YQ9BZA8 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC24.24■■□□□ 1.47
PCDH11YQ9BZA8 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDH11YQ9BZA8 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC24.24■■□□□ 1.47
PCDH11YQ9BZA8 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC24.24■■□□□ 1.47
PCDH11YQ9BZA8 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC24.24■■□□□ 1.47
PCDH11YQ9BZA8 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
PCDH11YQ9BZA8 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC24.24■■□□□ 1.47
PCDH11YQ9BZA8 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDH11YQ9BZA8 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDH11YQ9BZA8 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDH11YQ9BZA8 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDH11YQ9BZA8 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC24.24■■□□□ 1.47
PCDH11YQ9BZA8 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC24.24■■□□□ 1.47
PCDH11YQ9BZA8 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC24.23■■□□□ 1.47
PCDH11YQ9BZA8 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PCDH11YQ9BZA8 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDH11YQ9BZA8 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PCDH11YQ9BZA8 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDH11YQ9BZA8 LINC01521-201ENST00000504184 1943 ntBASIC24.23■■□□□ 1.47
PCDH11YQ9BZA8 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC24.23■■□□□ 1.47
PCDH11YQ9BZA8 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PCDH11YQ9BZA8 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDH11YQ9BZA8 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC24.23■■□□□ 1.47
PCDH11YQ9BZA8 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PCDH11YQ9BZA8 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC24.23■■□□□ 1.47
PCDH11YQ9BZA8 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC24.23■■□□□ 1.47
PCDH11YQ9BZA8 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC24.23■■□□□ 1.47
PCDH11YQ9BZA8 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC24.23■■□□□ 1.47
PCDH11YQ9BZA8 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC24.23■■□□□ 1.47
PCDH11YQ9BZA8 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDH11YQ9BZA8 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDH11YQ9BZA8 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDH11YQ9BZA8 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDH11YQ9BZA8 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC24.23■■□□□ 1.47
PCDH11YQ9BZA8 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
PCDH11YQ9BZA8 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDH11YQ9BZA8 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDH11YQ9BZA8 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PCDH11YQ9BZA8 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC24.22■■□□□ 1.47
PCDH11YQ9BZA8 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDH11YQ9BZA8 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDH11YQ9BZA8 LSM5-204ENST00000409909 740 ntTSL 2 BASIC24.22■■□□□ 1.47
PCDH11YQ9BZA8 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC24.22■■□□□ 1.47
PCDH11YQ9BZA8 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC24.22■■□□□ 1.47
PCDH11YQ9BZA8 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC24.22■■□□□ 1.47
PCDH11YQ9BZA8 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC24.22■■□□□ 1.47
PCDH11YQ9BZA8 GPALPP1-207ENST00000611650 899 ntBASIC24.22■■□□□ 1.47
PCDH11YQ9BZA8 AC120114.3-201ENST00000611923 658 ntBASIC24.22■■□□□ 1.47
PCDH11YQ9BZA8 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDH11YQ9BZA8 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC24.22■■□□□ 1.47
PCDH11YQ9BZA8 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC24.22■■□□□ 1.47
PCDH11YQ9BZA8 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDH11YQ9BZA8 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC24.22■■□□□ 1.47
PCDH11YQ9BZA8 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC24.21■■□□□ 1.47
PCDH11YQ9BZA8 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PCDH11YQ9BZA8 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDH11YQ9BZA8 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDH11YQ9BZA8 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC24.21■■□□□ 1.47
PCDH11YQ9BZA8 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC24.21■■□□□ 1.47
PCDH11YQ9BZA8 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PCDH11YQ9BZA8 KRT8P50-201ENST00000562022 1438 ntBASIC24.21■■□□□ 1.47
PCDH11YQ9BZA8 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC24.21■■□□□ 1.47
PCDH11YQ9BZA8 AC006538.3-201ENST00000612495 578 ntBASIC24.21■■□□□ 1.47
PCDH11YQ9BZA8 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms