Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.8■□□□□ 0.44
CNTNAP3Q9BZ76 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CNTNAP3Q9BZ76 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CNTNAP3Q9BZ76 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.8■□□□□ 0.44
CNTNAP3Q9BZ76 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.8■□□□□ 0.44
CNTNAP3Q9BZ76 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.8■□□□□ 0.44
CNTNAP3Q9BZ76 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNTNAP3Q9BZ76 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.8■□□□□ 0.44
CNTNAP3Q9BZ76 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.8■□□□□ 0.44
CNTNAP3Q9BZ76 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CNTNAP3Q9BZ76 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNTNAP3Q9BZ76 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNTNAP3Q9BZ76 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.8■□□□□ 0.44
CNTNAP3Q9BZ76 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNTNAP3Q9BZ76 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CNTNAP3Q9BZ76 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNTNAP3Q9BZ76 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNTNAP3Q9BZ76 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CNTNAP3Q9BZ76 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.79■□□□□ 0.44
CNTNAP3Q9BZ76 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.79■□□□□ 0.44
CNTNAP3Q9BZ76 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNTNAP3Q9BZ76 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNTNAP3Q9BZ76 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNTNAP3Q9BZ76 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNTNAP3Q9BZ76 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CNTNAP3Q9BZ76 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNTNAP3Q9BZ76 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CNTNAP3Q9BZ76 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNTNAP3Q9BZ76 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNTNAP3Q9BZ76 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.79■□□□□ 0.44
CNTNAP3Q9BZ76 MINOS1P3-201ENST00000457048 203 ntBASIC17.79■□□□□ 0.44
CNTNAP3Q9BZ76 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.79■□□□□ 0.44
CNTNAP3Q9BZ76 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CNTNAP3Q9BZ76 DUX4L17-201ENST00000557360 1267 ntBASIC17.79■□□□□ 0.44
CNTNAP3Q9BZ76 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.79■□□□□ 0.44
CNTNAP3Q9BZ76 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNTNAP3Q9BZ76 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.79■□□□□ 0.44
CNTNAP3Q9BZ76 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.79■□□□□ 0.44
CNTNAP3Q9BZ76 MTDHP5-201ENST00000598980 586 ntBASIC17.79■□□□□ 0.44
CNTNAP3Q9BZ76 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CNTNAP3Q9BZ76 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNTNAP3Q9BZ76 AF106564.1-201ENST00000607058 2553 ntBASIC17.79■□□□□ 0.44
CNTNAP3Q9BZ76 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CNTNAP3Q9BZ76 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CNTNAP3Q9BZ76 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNTNAP3Q9BZ76 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CNTNAP3Q9BZ76 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNTNAP3Q9BZ76 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNTNAP3Q9BZ76 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNTNAP3Q9BZ76 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CNTNAP3Q9BZ76 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNTNAP3Q9BZ76 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CNTNAP3Q9BZ76 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.78■□□□□ 0.44
CNTNAP3Q9BZ76 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CNTNAP3Q9BZ76 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNTNAP3Q9BZ76 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNTNAP3Q9BZ76 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.78■□□□□ 0.44
CNTNAP3Q9BZ76 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.78■□□□□ 0.44
CNTNAP3Q9BZ76 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CNTNAP3Q9BZ76 AC022494.1-201ENST00000466044 728 ntBASIC17.78■□□□□ 0.44
CNTNAP3Q9BZ76 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.78■□□□□ 0.44
CNTNAP3Q9BZ76 AC190387.1-201ENST00000551683 408 ntBASIC17.78■□□□□ 0.44
CNTNAP3Q9BZ76 AP002472.1-201ENST00000577490 586 ntBASIC17.78■□□□□ 0.44
CNTNAP3Q9BZ76 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.78■□□□□ 0.44
CNTNAP3Q9BZ76 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.78■□□□□ 0.44
CNTNAP3Q9BZ76 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.78■□□□□ 0.44
CNTNAP3Q9BZ76 AF228730.6-201ENST00000641497 218 ntBASIC17.78■□□□□ 0.44
CNTNAP3Q9BZ76 AC084121.3-201ENST00000641716 218 ntBASIC17.78■□□□□ 0.44
CNTNAP3Q9BZ76 AC105233.6-201ENST00000642093 218 ntBASIC17.78■□□□□ 0.44
CNTNAP3Q9BZ76 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CNTNAP3Q9BZ76 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.78■□□□□ 0.44
CNTNAP3Q9BZ76 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNTNAP3Q9BZ76 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.78■□□□□ 0.44
CNTNAP3Q9BZ76 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CNTNAP3Q9BZ76 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CNTNAP3Q9BZ76 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
CNTNAP3Q9BZ76 KRT8P41-201ENST00000533985 1514 ntBASIC17.77■□□□□ 0.44
CNTNAP3Q9BZ76 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNTNAP3Q9BZ76 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNTNAP3Q9BZ76 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.77■□□□□ 0.44
CNTNAP3Q9BZ76 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNTNAP3Q9BZ76 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CNTNAP3Q9BZ76 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.77■□□□□ 0.44
CNTNAP3Q9BZ76 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.77■□□□□ 0.44
CNTNAP3Q9BZ76 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CNTNAP3Q9BZ76 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNTNAP3Q9BZ76 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNTNAP3Q9BZ76 AC023274.1-201ENST00000418278 595 ntBASIC17.77■□□□□ 0.44
CNTNAP3Q9BZ76 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.77■□□□□ 0.44
CNTNAP3Q9BZ76 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CNTNAP3Q9BZ76 VENTXP7-201ENST00000475503 772 ntBASIC17.77■□□□□ 0.44
CNTNAP3Q9BZ76 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.77■□□□□ 0.44
CNTNAP3Q9BZ76 RNA5SP416-201ENST00000516838 111 ntBASIC17.77■□□□□ 0.44
CNTNAP3Q9BZ76 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.77■□□□□ 0.44
CNTNAP3Q9BZ76 AP005901.3-202ENST00000581653 237 ntBASIC17.77■□□□□ 0.44
CNTNAP3Q9BZ76 Z83851.2-201ENST00000609564 659 ntBASIC17.77■□□□□ 0.44
CNTNAP3Q9BZ76 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.77■□□□□ 0.44
CNTNAP3Q9BZ76 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CNTNAP3Q9BZ76 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CNTNAP3Q9BZ76 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms