Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPRD1AQ96P16 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
RPRD1AQ96P16 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPRD1AQ96P16 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPRD1AQ96P16 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPRD1AQ96P16 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RPRD1AQ96P16 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPRD1AQ96P16 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.28■□□□□ 0.68
RPRD1AQ96P16 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPRD1AQ96P16 AC006333.2-201ENST00000607957 2099 ntBASIC19.28■□□□□ 0.68
RPRD1AQ96P16 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPRD1AQ96P16 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RPRD1AQ96P16 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
RPRD1AQ96P16 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.28■□□□□ 0.68
RPRD1AQ96P16 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.28■□□□□ 0.68
RPRD1AQ96P16 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPRD1AQ96P16 YBX1P2-201ENST00000489612 999 ntBASIC19.28■□□□□ 0.68
RPRD1AQ96P16 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.28■□□□□ 0.68
RPRD1AQ96P16 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RPRD1AQ96P16 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.28■□□□□ 0.68
RPRD1AQ96P16 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
RPRD1AQ96P16 AL031432.5-201ENST00000641059 760 ntBASIC19.28■□□□□ 0.68
RPRD1AQ96P16 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPRD1AQ96P16 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RPRD1AQ96P16 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPRD1AQ96P16 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPRD1AQ96P16 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPRD1AQ96P16 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.28■□□□□ 0.68
RPRD1AQ96P16 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPRD1AQ96P16 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPRD1AQ96P16 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.27■□□□□ 0.68
RPRD1AQ96P16 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RPRD1AQ96P16 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPRD1AQ96P16 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
RPRD1AQ96P16 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPRD1AQ96P16 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.27■□□□□ 0.68
RPRD1AQ96P16 DUX4L26-201ENST00000489078 1255 ntBASIC19.27■□□□□ 0.68
RPRD1AQ96P16 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.27■□□□□ 0.68
RPRD1AQ96P16 AL049597.2-201ENST00000565575 961 ntBASIC19.27■□□□□ 0.68
RPRD1AQ96P16 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
RPRD1AQ96P16 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.27■□□□□ 0.68
RPRD1AQ96P16 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPRD1AQ96P16 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.27■□□□□ 0.68
RPRD1AQ96P16 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
RPRD1AQ96P16 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.27■□□□□ 0.67
RPRD1AQ96P16 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
RPRD1AQ96P16 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RPRD1AQ96P16 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RPRD1AQ96P16 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RPRD1AQ96P16 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPRD1AQ96P16 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPRD1AQ96P16 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPRD1AQ96P16 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPRD1AQ96P16 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPRD1AQ96P16 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
RPRD1AQ96P16 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPRD1AQ96P16 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
RPRD1AQ96P16 MIR564-202ENST00000385049 94 ntBASIC19.26■□□□□ 0.67
RPRD1AQ96P16 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.26■□□□□ 0.67
RPRD1AQ96P16 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.26■□□□□ 0.67
RPRD1AQ96P16 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.26■□□□□ 0.67
RPRD1AQ96P16 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.26■□□□□ 0.67
RPRD1AQ96P16 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RPRD1AQ96P16 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.26■□□□□ 0.67
RPRD1AQ96P16 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RPRD1AQ96P16 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.26■□□□□ 0.67
RPRD1AQ96P16 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.26■□□□□ 0.67
RPRD1AQ96P16 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
RPRD1AQ96P16 AC011558.1-201ENST00000623459 338 ntBASIC19.26■□□□□ 0.67
RPRD1AQ96P16 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPRD1AQ96P16 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPRD1AQ96P16 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RPRD1AQ96P16 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.26■□□□□ 0.67
RPRD1AQ96P16 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
RPRD1AQ96P16 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.26■□□□□ 0.67
RPRD1AQ96P16 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPRD1AQ96P16 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RPRD1AQ96P16 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPRD1AQ96P16 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RPRD1AQ96P16 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPRD1AQ96P16 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.25■□□□□ 0.67
RPRD1AQ96P16 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.25■□□□□ 0.67
RPRD1AQ96P16 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.25■□□□□ 0.67
RPRD1AQ96P16 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
RPRD1AQ96P16 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RPRD1AQ96P16 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.25■□□□□ 0.67
RPRD1AQ96P16 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPRD1AQ96P16 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPRD1AQ96P16 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPRD1AQ96P16 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPRD1AQ96P16 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPRD1AQ96P16 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPRD1AQ96P16 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPRD1AQ96P16 RNF152P1-201ENST00000397754 604 ntBASIC19.25■□□□□ 0.67
RPRD1AQ96P16 MIR1224-201ENST00000408193 85 ntBASIC19.25■□□□□ 0.67
RPRD1AQ96P16 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.25■□□□□ 0.67
RPRD1AQ96P16 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.25■□□□□ 0.67
RPRD1AQ96P16 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RPRD1AQ96P16 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RPRD1AQ96P16 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms