Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM54Q969K7 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM54Q969K7 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM54Q969K7 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM54Q969K7 AC005082.1-201ENST00000413042 2259 ntBASIC16.47■□□□□ 0.23
TMEM54Q969K7 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM54Q969K7 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM54Q969K7 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM54Q969K7 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM54Q969K7 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.47■□□□□ 0.23
TMEM54Q969K7 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.47■□□□□ 0.23
TMEM54Q969K7 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.47■□□□□ 0.23
TMEM54Q969K7 AP000593.1-201ENST00000393668 712 ntBASIC16.47■□□□□ 0.23
TMEM54Q969K7 AC087499.1-201ENST00000418141 1075 ntBASIC16.47■□□□□ 0.23
TMEM54Q969K7 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.47■□□□□ 0.23
TMEM54Q969K7 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
TMEM54Q969K7 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM54Q969K7 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
TMEM54Q969K7 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM54Q969K7 LINC01568-207ENST00000641790 1380 ntBASIC16.47■□□□□ 0.23
TMEM54Q969K7 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.47■□□□□ 0.23
TMEM54Q969K7 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM54Q969K7 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM54Q969K7 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM54Q969K7 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM54Q969K7 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM54Q969K7 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM54Q969K7 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM54Q969K7 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
TMEM54Q969K7 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.46■□□□□ 0.23
TMEM54Q969K7 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM54Q969K7 AC126763.1-201ENST00000552015 2118 ntBASIC16.46■□□□□ 0.23
TMEM54Q969K7 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM54Q969K7 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM54Q969K7 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM54Q969K7 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM54Q969K7 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.46■□□□□ 0.23
TMEM54Q969K7 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
TMEM54Q969K7 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.46■□□□□ 0.23
TMEM54Q969K7 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM54Q969K7 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM54Q969K7 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM54Q969K7 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM54Q969K7 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM54Q969K7 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM54Q969K7 ECEL1P2-202ENST00000465689 757 ntBASIC16.46■□□□□ 0.23
TMEM54Q969K7 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.46■□□□□ 0.23
TMEM54Q969K7 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.46■□□□□ 0.23
TMEM54Q969K7 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
TMEM54Q969K7 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM54Q969K7 FAM87A-204ENST00000613235 858 ntBASIC16.46■□□□□ 0.23
TMEM54Q969K7 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.46■□□□□ 0.23
TMEM54Q969K7 AIRN-201ENST00000601203 4374 ntBASIC16.46■□□□□ 0.23
TMEM54Q969K7 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM54Q969K7 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
TMEM54Q969K7 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
TMEM54Q969K7 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TMEM54Q969K7 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM54Q969K7 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM54Q969K7 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM54Q969K7 AC090164.3-201ENST00000610780 2143 ntBASIC16.46■□□□□ 0.23
TMEM54Q969K7 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM54Q969K7 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TMEM54Q969K7 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TMEM54Q969K7 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TMEM54Q969K7 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
TMEM54Q969K7 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
TMEM54Q969K7 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.45■□□□□ 0.22
TMEM54Q969K7 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TMEM54Q969K7 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM54Q969K7 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM54Q969K7 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM54Q969K7 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM54Q969K7 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
TMEM54Q969K7 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.45■□□□□ 0.22
TMEM54Q969K7 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM54Q969K7 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM54Q969K7 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM54Q969K7 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM54Q969K7 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.45■□□□□ 0.22
TMEM54Q969K7 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
TMEM54Q969K7 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.45■□□□□ 0.22
TMEM54Q969K7 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.45■□□□□ 0.22
TMEM54Q969K7 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.45■□□□□ 0.22
TMEM54Q969K7 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.45■□□□□ 0.22
TMEM54Q969K7 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.45■□□□□ 0.22
TMEM54Q969K7 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.45■□□□□ 0.22
TMEM54Q969K7 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.45■□□□□ 0.22
TMEM54Q969K7 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.45■□□□□ 0.22
TMEM54Q969K7 MYLKP1-201ENST00000509077 1580 ntBASIC16.45■□□□□ 0.22
TMEM54Q969K7 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM54Q969K7 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM54Q969K7 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.45■□□□□ 0.22
TMEM54Q969K7 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM54Q969K7 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM54Q969K7 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.45■□□□□ 0.22
TMEM54Q969K7 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM54Q969K7 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM54Q969K7 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM54Q969K7 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms