Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 RPP21-221ENST00000428040 594 ntTSL 2 BASIC23.91■■□□□ 1.42
SMARCC1Q92922 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SMARCC1Q92922 FAM197Y8-203ENST00000450145 560 ntBASIC23.91■■□□□ 1.42
SMARCC1Q92922 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SMARCC1Q92922 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC23.91■■□□□ 1.42
SMARCC1Q92922 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC23.91■■□□□ 1.42
SMARCC1Q92922 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC23.91■■□□□ 1.42
SMARCC1Q92922 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
SMARCC1Q92922 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
SMARCC1Q92922 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC23.91■■□□□ 1.42
SMARCC1Q92922 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC23.91■■□□□ 1.42
SMARCC1Q92922 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC23.91■■□□□ 1.42
SMARCC1Q92922 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC23.9■■□□□ 1.42
SMARCC1Q92922 AC007375.3-201ENST00000600936 2314 ntBASIC23.9■■□□□ 1.42
SMARCC1Q92922 FEM1AP3-201ENST00000403722 1741 ntBASIC23.9■■□□□ 1.42
SMARCC1Q92922 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
SMARCC1Q92922 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC23.9■■□□□ 1.42
SMARCC1Q92922 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SMARCC1Q92922 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SMARCC1Q92922 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC23.9■■□□□ 1.42
SMARCC1Q92922 KRT18P13-201ENST00000400056 1290 ntBASIC23.9■■□□□ 1.42
SMARCC1Q92922 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
SMARCC1Q92922 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SMARCC1Q92922 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC23.9■■□□□ 1.42
SMARCC1Q92922 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC23.9■■□□□ 1.42
SMARCC1Q92922 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
SMARCC1Q92922 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC23.9■■□□□ 1.42
SMARCC1Q92922 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SMARCC1Q92922 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
SMARCC1Q92922 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SMARCC1Q92922 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SMARCC1Q92922 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
SMARCC1Q92922 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
SMARCC1Q92922 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC23.89■■□□□ 1.41
SMARCC1Q92922 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
SMARCC1Q92922 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC23.89■■□□□ 1.41
SMARCC1Q92922 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC23.89■■□□□ 1.41
SMARCC1Q92922 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
SMARCC1Q92922 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
SMARCC1Q92922 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SMARCC1Q92922 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
SMARCC1Q92922 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
SMARCC1Q92922 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SMARCC1Q92922 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC23.89■■□□□ 1.41
SMARCC1Q92922 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SMARCC1Q92922 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
SMARCC1Q92922 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC23.88■■□□□ 1.41
SMARCC1Q92922 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC23.88■■□□□ 1.41
SMARCC1Q92922 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
SMARCC1Q92922 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
SMARCC1Q92922 KRT18P67-201ENST00000432816 1264 ntBASIC23.88■■□□□ 1.41
SMARCC1Q92922 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC23.88■■□□□ 1.41
SMARCC1Q92922 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC23.88■■□□□ 1.41
SMARCC1Q92922 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC23.88■■□□□ 1.41
SMARCC1Q92922 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC23.88■■□□□ 1.41
SMARCC1Q92922 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC23.88■■□□□ 1.41
SMARCC1Q92922 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC23.88■■□□□ 1.41
SMARCC1Q92922 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SMARCC1Q92922 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC23.88■■□□□ 1.41
SMARCC1Q92922 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
SMARCC1Q92922 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SMARCC1Q92922 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC23.87■■□□□ 1.41
SMARCC1Q92922 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SMARCC1Q92922 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC23.87■■□□□ 1.41
SMARCC1Q92922 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC23.87■■□□□ 1.41
SMARCC1Q92922 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SMARCC1Q92922 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SMARCC1Q92922 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC23.87■■□□□ 1.41
SMARCC1Q92922 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SMARCC1Q92922 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SMARCC1Q92922 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC23.87■■□□□ 1.41
SMARCC1Q92922 MED22-202ENST00000371999 987 ntTSL 3 BASIC23.87■■□□□ 1.41
SMARCC1Q92922 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC23.87■■□□□ 1.41
SMARCC1Q92922 AL031284.1-201ENST00000419297 478 ntBASIC23.87■■□□□ 1.41
SMARCC1Q92922 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC23.87■■□□□ 1.41
SMARCC1Q92922 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC23.87■■□□□ 1.41
SMARCC1Q92922 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC23.87■■□□□ 1.41
SMARCC1Q92922 AL591684.3-201ENST00000605187 298 ntBASIC23.87■■□□□ 1.41
SMARCC1Q92922 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SMARCC1Q92922 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC23.87■■□□□ 1.41
SMARCC1Q92922 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC23.87■■□□□ 1.41
SMARCC1Q92922 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SMARCC1Q92922 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC23.87■■□□□ 1.41
SMARCC1Q92922 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SMARCC1Q92922 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SMARCC1Q92922 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
SMARCC1Q92922 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SMARCC1Q92922 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC23.86■■□□□ 1.41
SMARCC1Q92922 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC23.86■■□□□ 1.41
SMARCC1Q92922 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC23.86■■□□□ 1.41
SMARCC1Q92922 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC23.86■■□□□ 1.41
SMARCC1Q92922 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SMARCC1Q92922 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC23.86■■□□□ 1.41
SMARCC1Q92922 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
SMARCC1Q92922 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC23.86■■□□□ 1.41
SMARCC1Q92922 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC23.86■■□□□ 1.41
SMARCC1Q92922 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC23.86■■□□□ 1.41
SMARCC1Q92922 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC23.86■■□□□ 1.41
SMARCC1Q92922 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC23.86■■□□□ 1.41
SMARCC1Q92922 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms