Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NUP35Q8NFH5 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NUP35Q8NFH5 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NUP35Q8NFH5 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NUP35Q8NFH5 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
NUP35Q8NFH5 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
NUP35Q8NFH5 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC14□□□□□ -0.17
NUP35Q8NFH5 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
NUP35Q8NFH5 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC14□□□□□ -0.17
NUP35Q8NFH5 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC14□□□□□ -0.17
NUP35Q8NFH5 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NUP35Q8NFH5 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NUP35Q8NFH5 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NUP35Q8NFH5 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
NUP35Q8NFH5 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC14□□□□□ -0.17
NUP35Q8NFH5 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
NUP35Q8NFH5 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NUP35Q8NFH5 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC14□□□□□ -0.17
NUP35Q8NFH5 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC14□□□□□ -0.17
NUP35Q8NFH5 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
NUP35Q8NFH5 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14□□□□□ -0.17
NUP35Q8NFH5 AC008406.3-201ENST00000620001 1374 ntBASIC14□□□□□ -0.17
NUP35Q8NFH5 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14□□□□□ -0.17
NUP35Q8NFH5 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14□□□□□ -0.17
NUP35Q8NFH5 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC14□□□□□ -0.17
NUP35Q8NFH5 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC14□□□□□ -0.17
NUP35Q8NFH5 FLYWCH1P1-201ENST00000460917 1874 ntBASIC14□□□□□ -0.17
NUP35Q8NFH5 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC14□□□□□ -0.17
NUP35Q8NFH5 BMP1-204ENST00000397814 836 ntTSL 4 BASIC14□□□□□ -0.17
NUP35Q8NFH5 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC14□□□□□ -0.17
NUP35Q8NFH5 RARRES2P4-201ENST00000514074 484 ntBASIC14□□□□□ -0.17
NUP35Q8NFH5 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC14□□□□□ -0.17
NUP35Q8NFH5 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC14□□□□□ -0.17
NUP35Q8NFH5 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC14□□□□□ -0.17
NUP35Q8NFH5 AC010536.3-201ENST00000620306 533 ntBASIC14□□□□□ -0.17
NUP35Q8NFH5 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC14□□□□□ -0.17
NUP35Q8NFH5 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NUP35Q8NFH5 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC14□□□□□ -0.17
NUP35Q8NFH5 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NUP35Q8NFH5 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14□□□□□ -0.17
NUP35Q8NFH5 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
NUP35Q8NFH5 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC14□□□□□ -0.17
NUP35Q8NFH5 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NUP35Q8NFH5 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NUP35Q8NFH5 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC14□□□□□ -0.17
NUP35Q8NFH5 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC14□□□□□ -0.17
NUP35Q8NFH5 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
NUP35Q8NFH5 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NUP35Q8NFH5 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NUP35Q8NFH5 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NUP35Q8NFH5 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
NUP35Q8NFH5 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NUP35Q8NFH5 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
NUP35Q8NFH5 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
NUP35Q8NFH5 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
NUP35Q8NFH5 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14□□□□□ -0.17
NUP35Q8NFH5 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
NUP35Q8NFH5 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NUP35Q8NFH5 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC13.99□□□□□ -0.17
NUP35Q8NFH5 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC13.99□□□□□ -0.17
NUP35Q8NFH5 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NUP35Q8NFH5 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NUP35Q8NFH5 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NUP35Q8NFH5 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC13.99□□□□□ -0.17
NUP35Q8NFH5 AC093677.2-201ENST00000600169 1863 ntBASIC13.99□□□□□ -0.17
NUP35Q8NFH5 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
NUP35Q8NFH5 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
NUP35Q8NFH5 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
NUP35Q8NFH5 AL499627.1-201ENST00000569373 2188 ntBASIC13.99□□□□□ -0.17
NUP35Q8NFH5 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NUP35Q8NFH5 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
NUP35Q8NFH5 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC13.99□□□□□ -0.17
NUP35Q8NFH5 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NUP35Q8NFH5 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
NUP35Q8NFH5 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC13.99□□□□□ -0.17
NUP35Q8NFH5 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
NUP35Q8NFH5 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC13.99□□□□□ -0.17
NUP35Q8NFH5 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NUP35Q8NFH5 PARP1-202ENST00000366792 553 ntTSL 3 BASIC13.99□□□□□ -0.17
NUP35Q8NFH5 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
NUP35Q8NFH5 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NUP35Q8NFH5 UQCRFS1P1-201ENST00000435169 820 ntBASIC13.99□□□□□ -0.17
NUP35Q8NFH5 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC13.99□□□□□ -0.17
NUP35Q8NFH5 AC007322.4-201ENST00000509611 723 ntBASIC13.99□□□□□ -0.17
NUP35Q8NFH5 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
NUP35Q8NFH5 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NUP35Q8NFH5 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
NUP35Q8NFH5 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC13.99□□□□□ -0.17
NUP35Q8NFH5 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NUP35Q8NFH5 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC13.99□□□□□ -0.17
NUP35Q8NFH5 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NUP35Q8NFH5 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC13.99□□□□□ -0.17
NUP35Q8NFH5 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC13.99□□□□□ -0.17
NUP35Q8NFH5 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NUP35Q8NFH5 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC13.98□□□□□ -0.17
NUP35Q8NFH5 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NUP35Q8NFH5 KRT8P8-201ENST00000434750 1448 ntBASIC13.98□□□□□ -0.17
NUP35Q8NFH5 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NUP35Q8NFH5 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NUP35Q8NFH5 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms