Protein–RNA interactions for Protein: Q8NCN4

RNF169, E3 ubiquitin-protein ligase RNF169, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF169Q8NCN4 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
RNF169Q8NCN4 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF169Q8NCN4 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF169Q8NCN4 AL512353.2-201ENST00000448759 1962 ntBASIC20.35■□□□□ 0.85
RNF169Q8NCN4 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
RNF169Q8NCN4 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF169Q8NCN4 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF169Q8NCN4 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.35■□□□□ 0.85
RNF169Q8NCN4 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF169Q8NCN4 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
RNF169Q8NCN4 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RNF169Q8NCN4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF169Q8NCN4 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
RNF169Q8NCN4 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RNF169Q8NCN4 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.35■□□□□ 0.85
RNF169Q8NCN4 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.35■□□□□ 0.85
RNF169Q8NCN4 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF169Q8NCN4 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RNF169Q8NCN4 AC012313.10-201ENST00000623509 926 ntBASIC20.35■□□□□ 0.85
RNF169Q8NCN4 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF169Q8NCN4 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF169Q8NCN4 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF169Q8NCN4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF169Q8NCN4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
RNF169Q8NCN4 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF169Q8NCN4 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF169Q8NCN4 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF169Q8NCN4 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
RNF169Q8NCN4 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF169Q8NCN4 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.35■□□□□ 0.85
RNF169Q8NCN4 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
RNF169Q8NCN4 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.34■□□□□ 0.85
RNF169Q8NCN4 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF169Q8NCN4 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
RNF169Q8NCN4 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.34■□□□□ 0.85
RNF169Q8NCN4 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.34■□□□□ 0.85
RNF169Q8NCN4 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF169Q8NCN4 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
RNF169Q8NCN4 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.34■□□□□ 0.85
RNF169Q8NCN4 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.34■□□□□ 0.85
RNF169Q8NCN4 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF169Q8NCN4 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF169Q8NCN4 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF169Q8NCN4 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF169Q8NCN4 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF169Q8NCN4 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.34■□□□□ 0.85
RNF169Q8NCN4 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RNF169Q8NCN4 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RNF169Q8NCN4 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.34■□□□□ 0.85
RNF169Q8NCN4 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
RNF169Q8NCN4 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RNF169Q8NCN4 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.34■□□□□ 0.85
RNF169Q8NCN4 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.34■□□□□ 0.85
RNF169Q8NCN4 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.34■□□□□ 0.85
RNF169Q8NCN4 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF169Q8NCN4 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.34■□□□□ 0.85
RNF169Q8NCN4 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.34■□□□□ 0.85
RNF169Q8NCN4 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF169Q8NCN4 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF169Q8NCN4 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF169Q8NCN4 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF169Q8NCN4 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF169Q8NCN4 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF169Q8NCN4 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RNF169Q8NCN4 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF169Q8NCN4 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF169Q8NCN4 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.33■□□□□ 0.85
RNF169Q8NCN4 KRT18P23-201ENST00000435622 1283 ntBASIC20.33■□□□□ 0.85
RNF169Q8NCN4 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.33■□□□□ 0.85
RNF169Q8NCN4 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.33■□□□□ 0.85
RNF169Q8NCN4 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.33■□□□□ 0.85
RNF169Q8NCN4 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.33■□□□□ 0.84
RNF169Q8NCN4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.33■□□□□ 0.84
RNF169Q8NCN4 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
RNF169Q8NCN4 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF169Q8NCN4 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF169Q8NCN4 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF169Q8NCN4 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF169Q8NCN4 IRX1P1-201ENST00000438849 1838 ntBASIC20.32■□□□□ 0.84
RNF169Q8NCN4 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF169Q8NCN4 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF169Q8NCN4 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF169Q8NCN4 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RNF169Q8NCN4 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RNF169Q8NCN4 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF169Q8NCN4 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.32■□□□□ 0.84
RNF169Q8NCN4 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF169Q8NCN4 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF169Q8NCN4 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
RNF169Q8NCN4 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF169Q8NCN4 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF169Q8NCN4 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF169Q8NCN4 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF169Q8NCN4 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF169Q8NCN4 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF169Q8NCN4 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.32■□□□□ 0.84
RNF169Q8NCN4 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.32■□□□□ 0.84
RNF169Q8NCN4 AC011498.5-201ENST00000592027 486 ntBASIC20.32■□□□□ 0.84
RNF169Q8NCN4 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20.32■□□□□ 0.84
RNF169Q8NCN4 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms