Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNEP1R1Q8N9A8 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNEP1R1Q8N9A8 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CNEP1R1Q8N9A8 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.62■□□□□ 0.25
CNEP1R1Q8N9A8 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNEP1R1Q8N9A8 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC16.62■□□□□ 0.25
CNEP1R1Q8N9A8 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.62■□□□□ 0.25
CNEP1R1Q8N9A8 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CNEP1R1Q8N9A8 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CNEP1R1Q8N9A8 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.62■□□□□ 0.25
CNEP1R1Q8N9A8 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CNEP1R1Q8N9A8 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNEP1R1Q8N9A8 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.62■□□□□ 0.25
CNEP1R1Q8N9A8 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CNEP1R1Q8N9A8 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CNEP1R1Q8N9A8 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNEP1R1Q8N9A8 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNEP1R1Q8N9A8 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.62■□□□□ 0.25
CNEP1R1Q8N9A8 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CNEP1R1Q8N9A8 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.62■□□□□ 0.25
CNEP1R1Q8N9A8 AC034232.1-201ENST00000506026 1064 ntBASIC16.62■□□□□ 0.25
CNEP1R1Q8N9A8 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNEP1R1Q8N9A8 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.62■□□□□ 0.25
CNEP1R1Q8N9A8 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.62■□□□□ 0.25
CNEP1R1Q8N9A8 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.62■□□□□ 0.25
CNEP1R1Q8N9A8 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CNEP1R1Q8N9A8 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.62■□□□□ 0.25
CNEP1R1Q8N9A8 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.62■□□□□ 0.25
CNEP1R1Q8N9A8 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.62■□□□□ 0.25
CNEP1R1Q8N9A8 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CNEP1R1Q8N9A8 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNEP1R1Q8N9A8 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNEP1R1Q8N9A8 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.62■□□□□ 0.25
CNEP1R1Q8N9A8 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CNEP1R1Q8N9A8 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.62■□□□□ 0.25
CNEP1R1Q8N9A8 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNEP1R1Q8N9A8 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.62■□□□□ 0.25
CNEP1R1Q8N9A8 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
CNEP1R1Q8N9A8 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNEP1R1Q8N9A8 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNEP1R1Q8N9A8 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNEP1R1Q8N9A8 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNEP1R1Q8N9A8 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNEP1R1Q8N9A8 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CNEP1R1Q8N9A8 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CNEP1R1Q8N9A8 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNEP1R1Q8N9A8 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNEP1R1Q8N9A8 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNEP1R1Q8N9A8 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.61■□□□□ 0.25
CNEP1R1Q8N9A8 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNEP1R1Q8N9A8 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNEP1R1Q8N9A8 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNEP1R1Q8N9A8 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.61■□□□□ 0.25
CNEP1R1Q8N9A8 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.61■□□□□ 0.25
CNEP1R1Q8N9A8 STARP1-201ENST00000397973 869 ntBASIC16.61■□□□□ 0.25
CNEP1R1Q8N9A8 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.61■□□□□ 0.25
CNEP1R1Q8N9A8 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.61■□□□□ 0.25
CNEP1R1Q8N9A8 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.61■□□□□ 0.25
CNEP1R1Q8N9A8 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.61■□□□□ 0.25
CNEP1R1Q8N9A8 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.61■□□□□ 0.25
CNEP1R1Q8N9A8 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
CNEP1R1Q8N9A8 AC008556.1-201ENST00000610908 2040 ntBASIC16.61■□□□□ 0.25
CNEP1R1Q8N9A8 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNEP1R1Q8N9A8 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNEP1R1Q8N9A8 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.61■□□□□ 0.25
CNEP1R1Q8N9A8 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNEP1R1Q8N9A8 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNEP1R1Q8N9A8 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNEP1R1Q8N9A8 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CNEP1R1Q8N9A8 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNEP1R1Q8N9A8 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNEP1R1Q8N9A8 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.6■□□□□ 0.25
CNEP1R1Q8N9A8 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNEP1R1Q8N9A8 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNEP1R1Q8N9A8 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNEP1R1Q8N9A8 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CNEP1R1Q8N9A8 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNEP1R1Q8N9A8 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CNEP1R1Q8N9A8 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CNEP1R1Q8N9A8 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CNEP1R1Q8N9A8 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CNEP1R1Q8N9A8 UPK3BP1-201ENST00000428678 509 ntBASIC16.6■□□□□ 0.25
CNEP1R1Q8N9A8 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.6■□□□□ 0.25
CNEP1R1Q8N9A8 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.6■□□□□ 0.25
CNEP1R1Q8N9A8 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNEP1R1Q8N9A8 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNEP1R1Q8N9A8 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.6■□□□□ 0.25
CNEP1R1Q8N9A8 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
CNEP1R1Q8N9A8 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CNEP1R1Q8N9A8 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNEP1R1Q8N9A8 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
CNEP1R1Q8N9A8 AC112497.1-201ENST00000624824 639 ntBASIC16.6■□□□□ 0.25
CNEP1R1Q8N9A8 AL121956.5-201ENST00000625261 221 ntBASIC16.6■□□□□ 0.25
CNEP1R1Q8N9A8 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CNEP1R1Q8N9A8 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNEP1R1Q8N9A8 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.6■□□□□ 0.25
CNEP1R1Q8N9A8 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
CNEP1R1Q8N9A8 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CNEP1R1Q8N9A8 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CNEP1R1Q8N9A8 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms