Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SIX5Q8N196 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SIX5Q8N196 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SIX5Q8N196 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SIX5Q8N196 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.13■□□□□ 0.65
SIX5Q8N196 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
SIX5Q8N196 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SIX5Q8N196 MIR1233-2-201ENST00000408138 82 ntBASIC19.13■□□□□ 0.65
SIX5Q8N196 MIR1233-1-201ENST00000408722 82 ntBASIC19.13■□□□□ 0.65
SIX5Q8N196 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.13■□□□□ 0.65
SIX5Q8N196 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.13■□□□□ 0.65
SIX5Q8N196 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.13■□□□□ 0.65
SIX5Q8N196 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SIX5Q8N196 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.13■□□□□ 0.65
SIX5Q8N196 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.13■□□□□ 0.65
SIX5Q8N196 SLC25A1P1-201ENST00000528351 927 ntBASIC19.13■□□□□ 0.65
SIX5Q8N196 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.13■□□□□ 0.65
SIX5Q8N196 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.13■□□□□ 0.65
SIX5Q8N196 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.13■□□□□ 0.65
SIX5Q8N196 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SIX5Q8N196 REXO1L6P-202ENST00000619970 1078 ntBASIC19.13■□□□□ 0.65
SIX5Q8N196 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.13■□□□□ 0.65
SIX5Q8N196 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.13■□□□□ 0.65
SIX5Q8N196 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.13■□□□□ 0.65
SIX5Q8N196 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.13■□□□□ 0.65
SIX5Q8N196 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SIX5Q8N196 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SIX5Q8N196 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SIX5Q8N196 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SIX5Q8N196 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SIX5Q8N196 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SIX5Q8N196 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SIX5Q8N196 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SIX5Q8N196 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SIX5Q8N196 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SIX5Q8N196 AC020907.5-201ENST00000624372 1936 ntBASIC19.12■□□□□ 0.65
SIX5Q8N196 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SIX5Q8N196 ZNF815P-204ENST00000434898 1737 ntBASIC19.12■□□□□ 0.65
SIX5Q8N196 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.12■□□□□ 0.65
SIX5Q8N196 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SIX5Q8N196 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SIX5Q8N196 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SIX5Q8N196 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SIX5Q8N196 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.12■□□□□ 0.65
SIX5Q8N196 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
SIX5Q8N196 AF238378.1-201ENST00000526806 358 ntBASIC19.12■□□□□ 0.65
SIX5Q8N196 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.12■□□□□ 0.65
SIX5Q8N196 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.12■□□□□ 0.65
SIX5Q8N196 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.12■□□□□ 0.65
SIX5Q8N196 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SIX5Q8N196 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
SIX5Q8N196 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SIX5Q8N196 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.12■□□□□ 0.65
SIX5Q8N196 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SIX5Q8N196 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SIX5Q8N196 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
SIX5Q8N196 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SIX5Q8N196 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SIX5Q8N196 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SIX5Q8N196 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SIX5Q8N196 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
SIX5Q8N196 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SIX5Q8N196 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SIX5Q8N196 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SIX5Q8N196 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.11■□□□□ 0.65
SIX5Q8N196 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SIX5Q8N196 NUS1P2-201ENST00000417358 873 ntBASIC19.11■□□□□ 0.65
SIX5Q8N196 IGHV3-47-201ENST00000425060 335 ntBASIC19.11■□□□□ 0.65
SIX5Q8N196 AC092183.1-201ENST00000469884 875 ntBASIC19.11■□□□□ 0.65
SIX5Q8N196 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.11■□□□□ 0.65
SIX5Q8N196 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
SIX5Q8N196 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.11■□□□□ 0.65
SIX5Q8N196 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.11■□□□□ 0.65
SIX5Q8N196 AL773604.1-201ENST00000617417 272 ntBASIC19.11■□□□□ 0.65
SIX5Q8N196 TP73-AS1-207ENST00000624167 988 ntBASIC19.11■□□□□ 0.65
SIX5Q8N196 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.11■□□□□ 0.65
SIX5Q8N196 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SIX5Q8N196 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SIX5Q8N196 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.11■□□□□ 0.65
SIX5Q8N196 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SIX5Q8N196 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SIX5Q8N196 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.1■□□□□ 0.65
SIX5Q8N196 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SIX5Q8N196 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SIX5Q8N196 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SIX5Q8N196 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.1■□□□□ 0.65
SIX5Q8N196 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
SIX5Q8N196 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SIX5Q8N196 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SIX5Q8N196 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.1■□□□□ 0.65
SIX5Q8N196 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
SIX5Q8N196 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.1■□□□□ 0.65
SIX5Q8N196 KRT18P23-201ENST00000435622 1283 ntBASIC19.1■□□□□ 0.65
SIX5Q8N196 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.1■□□□□ 0.65
SIX5Q8N196 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.1■□□□□ 0.65
SIX5Q8N196 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.1■□□□□ 0.65
SIX5Q8N196 RNA5SP419-201ENST00000515908 135 ntBASIC19.1■□□□□ 0.65
SIX5Q8N196 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SIX5Q8N196 KRT18P58-201ENST00000527480 1120 ntBASIC19.1■□□□□ 0.65
SIX5Q8N196 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms