Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTCHD4Q6ZW05 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTCHD4Q6ZW05 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTCHD4Q6ZW05 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
PTCHD4Q6ZW05 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.24■□□□□ 0.35
PTCHD4Q6ZW05 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTCHD4Q6ZW05 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTCHD4Q6ZW05 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.24■□□□□ 0.35
PTCHD4Q6ZW05 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.24■□□□□ 0.35
PTCHD4Q6ZW05 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTCHD4Q6ZW05 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTCHD4Q6ZW05 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.24■□□□□ 0.35
PTCHD4Q6ZW05 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTCHD4Q6ZW05 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTCHD4Q6ZW05 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTCHD4Q6ZW05 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PTCHD4Q6ZW05 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTCHD4Q6ZW05 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.24■□□□□ 0.35
PTCHD4Q6ZW05 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.24■□□□□ 0.35
PTCHD4Q6ZW05 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.24■□□□□ 0.35
PTCHD4Q6ZW05 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTCHD4Q6ZW05 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.24■□□□□ 0.35
PTCHD4Q6ZW05 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTCHD4Q6ZW05 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.24■□□□□ 0.35
PTCHD4Q6ZW05 AC126763.1-201ENST00000552015 2118 ntBASIC17.24■□□□□ 0.35
PTCHD4Q6ZW05 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.24■□□□□ 0.35
PTCHD4Q6ZW05 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTCHD4Q6ZW05 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.24■□□□□ 0.35
PTCHD4Q6ZW05 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
PTCHD4Q6ZW05 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTCHD4Q6ZW05 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTCHD4Q6ZW05 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTCHD4Q6ZW05 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.23■□□□□ 0.35
PTCHD4Q6ZW05 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTCHD4Q6ZW05 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
PTCHD4Q6ZW05 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTCHD4Q6ZW05 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.23■□□□□ 0.35
PTCHD4Q6ZW05 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTCHD4Q6ZW05 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.23■□□□□ 0.35
PTCHD4Q6ZW05 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTCHD4Q6ZW05 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
PTCHD4Q6ZW05 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTCHD4Q6ZW05 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTCHD4Q6ZW05 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.23■□□□□ 0.35
PTCHD4Q6ZW05 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PTCHD4Q6ZW05 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTCHD4Q6ZW05 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PTCHD4Q6ZW05 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
PTCHD4Q6ZW05 TUBB8P6-201ENST00000436895 1288 ntBASIC17.23■□□□□ 0.35
PTCHD4Q6ZW05 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.23■□□□□ 0.35
PTCHD4Q6ZW05 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.23■□□□□ 0.35
PTCHD4Q6ZW05 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.23■□□□□ 0.35
PTCHD4Q6ZW05 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTCHD4Q6ZW05 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PTCHD4Q6ZW05 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTCHD4Q6ZW05 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTCHD4Q6ZW05 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.23■□□□□ 0.35
PTCHD4Q6ZW05 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
PTCHD4Q6ZW05 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTCHD4Q6ZW05 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.23■□□□□ 0.35
PTCHD4Q6ZW05 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
PTCHD4Q6ZW05 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.23■□□□□ 0.35
PTCHD4Q6ZW05 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTCHD4Q6ZW05 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTCHD4Q6ZW05 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.22■□□□□ 0.35
PTCHD4Q6ZW05 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.22■□□□□ 0.35
PTCHD4Q6ZW05 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTCHD4Q6ZW05 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.22■□□□□ 0.35
PTCHD4Q6ZW05 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.22■□□□□ 0.35
PTCHD4Q6ZW05 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.22■□□□□ 0.35
PTCHD4Q6ZW05 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PTCHD4Q6ZW05 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTCHD4Q6ZW05 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PTCHD4Q6ZW05 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTCHD4Q6ZW05 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTCHD4Q6ZW05 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTCHD4Q6ZW05 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.22■□□□□ 0.35
PTCHD4Q6ZW05 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
PTCHD4Q6ZW05 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.22■□□□□ 0.35
PTCHD4Q6ZW05 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTCHD4Q6ZW05 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PTCHD4Q6ZW05 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PTCHD4Q6ZW05 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.22■□□□□ 0.35
PTCHD4Q6ZW05 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.22■□□□□ 0.35
PTCHD4Q6ZW05 UNC93B4-201ENST00000505679 747 ntBASIC17.22■□□□□ 0.35
PTCHD4Q6ZW05 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PTCHD4Q6ZW05 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PTCHD4Q6ZW05 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.22■□□□□ 0.35
PTCHD4Q6ZW05 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTCHD4Q6ZW05 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PTCHD4Q6ZW05 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PTCHD4Q6ZW05 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.22■□□□□ 0.35
PTCHD4Q6ZW05 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTCHD4Q6ZW05 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.22■□□□□ 0.35
PTCHD4Q6ZW05 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PTCHD4Q6ZW05 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTCHD4Q6ZW05 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PTCHD4Q6ZW05 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PTCHD4Q6ZW05 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
PTCHD4Q6ZW05 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms