Protein–RNA interactions for Protein: Q6XYD6

BRD3OS, BRD3 opposite strand, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3OSQ6XYD6 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
BRD3OSQ6XYD6 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
BRD3OSQ6XYD6 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
BRD3OSQ6XYD6 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC15.17■□□□□ 0.02
BRD3OSQ6XYD6 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
BRD3OSQ6XYD6 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
BRD3OSQ6XYD6 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
BRD3OSQ6XYD6 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.17■□□□□ 0.02
BRD3OSQ6XYD6 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
BRD3OSQ6XYD6 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
BRD3OSQ6XYD6 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
BRD3OSQ6XYD6 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
BRD3OSQ6XYD6 AL109659.2-201ENST00000606809 1674 ntBASIC15.17■□□□□ 0.02
BRD3OSQ6XYD6 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC15.17■□□□□ 0.02
BRD3OSQ6XYD6 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
BRD3OSQ6XYD6 HBZP1-201ENST00000354915 429 ntBASIC15.17■□□□□ 0.02
BRD3OSQ6XYD6 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.17■□□□□ 0.02
BRD3OSQ6XYD6 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
BRD3OSQ6XYD6 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
BRD3OSQ6XYD6 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
BRD3OSQ6XYD6 SEC1P-202ENST00000473944 940 ntBASIC15.17■□□□□ 0.02
BRD3OSQ6XYD6 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
BRD3OSQ6XYD6 KRT18P56-201ENST00000507275 550 ntBASIC15.17■□□□□ 0.02
BRD3OSQ6XYD6 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.17■□□□□ 0.02
BRD3OSQ6XYD6 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
BRD3OSQ6XYD6 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC15.17■□□□□ 0.02
BRD3OSQ6XYD6 AC069148.1-201ENST00000608741 768 ntBASIC15.17■□□□□ 0.02
BRD3OSQ6XYD6 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.17■□□□□ 0.02
BRD3OSQ6XYD6 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.17■□□□□ 0.02
BRD3OSQ6XYD6 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
BRD3OSQ6XYD6 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
BRD3OSQ6XYD6 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC15.17■□□□□ 0.02
BRD3OSQ6XYD6 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
BRD3OSQ6XYD6 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC15.17■□□□□ 0.02
BRD3OSQ6XYD6 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
BRD3OSQ6XYD6 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BRD3OSQ6XYD6 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC15.16■□□□□ 0.02
BRD3OSQ6XYD6 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BRD3OSQ6XYD6 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
BRD3OSQ6XYD6 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BRD3OSQ6XYD6 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BRD3OSQ6XYD6 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
BRD3OSQ6XYD6 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
BRD3OSQ6XYD6 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BRD3OSQ6XYD6 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BRD3OSQ6XYD6 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC15.16■□□□□ 0.02
BRD3OSQ6XYD6 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BRD3OSQ6XYD6 KRT18P23-201ENST00000435622 1283 ntBASIC15.16■□□□□ 0.02
BRD3OSQ6XYD6 SPDYE13P-201ENST00000445314 798 ntBASIC15.16■□□□□ 0.02
BRD3OSQ6XYD6 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.16■□□□□ 0.02
BRD3OSQ6XYD6 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.16■□□□□ 0.02
BRD3OSQ6XYD6 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
BRD3OSQ6XYD6 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC15.16■□□□□ 0.02
BRD3OSQ6XYD6 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.16■□□□□ 0.02
BRD3OSQ6XYD6 NDUFV2-AS1-203ENST00000608008 779 ntBASIC15.16■□□□□ 0.02
BRD3OSQ6XYD6 AL157888.1-201ENST00000631930 593 ntBASIC15.16■□□□□ 0.02
BRD3OSQ6XYD6 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BRD3OSQ6XYD6 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC15.16■□□□□ 0.02
BRD3OSQ6XYD6 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
BRD3OSQ6XYD6 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
BRD3OSQ6XYD6 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BRD3OSQ6XYD6 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BRD3OSQ6XYD6 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC15.16■□□□□ 0.02
BRD3OSQ6XYD6 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BRD3OSQ6XYD6 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC15.16■□□□□ 0.02
BRD3OSQ6XYD6 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
BRD3OSQ6XYD6 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
BRD3OSQ6XYD6 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
BRD3OSQ6XYD6 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
BRD3OSQ6XYD6 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC15.15■□□□□ 0.02
BRD3OSQ6XYD6 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
BRD3OSQ6XYD6 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BRD3OSQ6XYD6 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BRD3OSQ6XYD6 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BRD3OSQ6XYD6 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
BRD3OSQ6XYD6 AL645929.1-201ENST00000420084 975 ntBASIC15.15■□□□□ 0.02
BRD3OSQ6XYD6 ELP6-205ENST00000439305 880 ntTSL 2 BASIC15.15■□□□□ 0.02
BRD3OSQ6XYD6 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.15■□□□□ 0.02
BRD3OSQ6XYD6 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
BRD3OSQ6XYD6 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
BRD3OSQ6XYD6 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC15.15■□□□□ 0.02
BRD3OSQ6XYD6 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC15.15■□□□□ 0.02
BRD3OSQ6XYD6 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
BRD3OSQ6XYD6 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BRD3OSQ6XYD6 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
BRD3OSQ6XYD6 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BRD3OSQ6XYD6 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
BRD3OSQ6XYD6 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
BRD3OSQ6XYD6 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BRD3OSQ6XYD6 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
BRD3OSQ6XYD6 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
BRD3OSQ6XYD6 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BRD3OSQ6XYD6 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC15.15■□□□□ 0.02
BRD3OSQ6XYD6 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BRD3OSQ6XYD6 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BRD3OSQ6XYD6 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BRD3OSQ6XYD6 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
BRD3OSQ6XYD6 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BRD3OSQ6XYD6 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BRD3OSQ6XYD6 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms