Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.82■□□□□ 0.28
NHLRC1Q6VVB1 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
NHLRC1Q6VVB1 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
NHLRC1Q6VVB1 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.82■□□□□ 0.28
NHLRC1Q6VVB1 RBM17P1-201ENST00000453646 1190 ntBASIC16.82■□□□□ 0.28
NHLRC1Q6VVB1 AC097488.1-201ENST00000507834 756 ntBASIC16.82■□□□□ 0.28
NHLRC1Q6VVB1 AP005242.2-201ENST00000580065 1175 ntBASIC16.82■□□□□ 0.28
NHLRC1Q6VVB1 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NHLRC1Q6VVB1 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NHLRC1Q6VVB1 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NHLRC1Q6VVB1 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
NHLRC1Q6VVB1 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NHLRC1Q6VVB1 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.82■□□□□ 0.28
NHLRC1Q6VVB1 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
NHLRC1Q6VVB1 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NHLRC1Q6VVB1 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.82■□□□□ 0.28
NHLRC1Q6VVB1 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
NHLRC1Q6VVB1 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.82■□□□□ 0.28
NHLRC1Q6VVB1 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.82■□□□□ 0.28
NHLRC1Q6VVB1 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.81■□□□□ 0.28
NHLRC1Q6VVB1 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NHLRC1Q6VVB1 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.81■□□□□ 0.28
NHLRC1Q6VVB1 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.81■□□□□ 0.28
NHLRC1Q6VVB1 HEIH-201ENST00000623091 1652 ntBASIC16.81■□□□□ 0.28
NHLRC1Q6VVB1 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NHLRC1Q6VVB1 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.81■□□□□ 0.28
NHLRC1Q6VVB1 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NHLRC1Q6VVB1 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NHLRC1Q6VVB1 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
NHLRC1Q6VVB1 AC079598.2-202ENST00000546624 1451 ntBASIC16.81■□□□□ 0.28
NHLRC1Q6VVB1 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.81■□□□□ 0.28
NHLRC1Q6VVB1 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NHLRC1Q6VVB1 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NHLRC1Q6VVB1 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NHLRC1Q6VVB1 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NHLRC1Q6VVB1 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
NHLRC1Q6VVB1 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.81■□□□□ 0.28
NHLRC1Q6VVB1 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.81■□□□□ 0.28
NHLRC1Q6VVB1 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.81■□□□□ 0.28
NHLRC1Q6VVB1 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.81■□□□□ 0.28
NHLRC1Q6VVB1 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.81■□□□□ 0.28
NHLRC1Q6VVB1 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NHLRC1Q6VVB1 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NHLRC1Q6VVB1 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NHLRC1Q6VVB1 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NHLRC1Q6VVB1 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NHLRC1Q6VVB1 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NHLRC1Q6VVB1 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NHLRC1Q6VVB1 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.81■□□□□ 0.28
NHLRC1Q6VVB1 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.81■□□□□ 0.28
NHLRC1Q6VVB1 MTMR9LP-203ENST00000426597 1545 ntBASIC16.8■□□□□ 0.28
NHLRC1Q6VVB1 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NHLRC1Q6VVB1 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.8■□□□□ 0.28
NHLRC1Q6VVB1 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.8■□□□□ 0.28
NHLRC1Q6VVB1 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NHLRC1Q6VVB1 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NHLRC1Q6VVB1 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NHLRC1Q6VVB1 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
NHLRC1Q6VVB1 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
NHLRC1Q6VVB1 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
NHLRC1Q6VVB1 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NHLRC1Q6VVB1 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
NHLRC1Q6VVB1 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.8■□□□□ 0.28
NHLRC1Q6VVB1 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.8■□□□□ 0.28
NHLRC1Q6VVB1 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NHLRC1Q6VVB1 MFAP1P1-201ENST00000442257 1255 ntBASIC16.8■□□□□ 0.28
NHLRC1Q6VVB1 TSPY15P-201ENST00000457163 923 ntBASIC16.8■□□□□ 0.28
NHLRC1Q6VVB1 SNORA78-201ENST00000459373 127 ntBASIC16.8■□□□□ 0.28
NHLRC1Q6VVB1 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.8■□□□□ 0.28
NHLRC1Q6VVB1 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.8■□□□□ 0.28
NHLRC1Q6VVB1 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NHLRC1Q6VVB1 SLC25A1P4-201ENST00000567977 778 ntBASIC16.8■□□□□ 0.28
NHLRC1Q6VVB1 MIR4497-201ENST00000583208 89 ntBASIC16.8■□□□□ 0.28
NHLRC1Q6VVB1 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.8■□□□□ 0.28
NHLRC1Q6VVB1 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.8■□□□□ 0.28
NHLRC1Q6VVB1 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NHLRC1Q6VVB1 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NHLRC1Q6VVB1 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.8■□□□□ 0.28
NHLRC1Q6VVB1 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
NHLRC1Q6VVB1 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
NHLRC1Q6VVB1 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NHLRC1Q6VVB1 AC104581.1-202ENST00000635932 2618 ntBASIC16.8■□□□□ 0.28
NHLRC1Q6VVB1 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NHLRC1Q6VVB1 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.8■□□□□ 0.28
NHLRC1Q6VVB1 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
NHLRC1Q6VVB1 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NHLRC1Q6VVB1 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NHLRC1Q6VVB1 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
NHLRC1Q6VVB1 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
NHLRC1Q6VVB1 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.79■□□□□ 0.28
NHLRC1Q6VVB1 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NHLRC1Q6VVB1 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NHLRC1Q6VVB1 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.79■□□□□ 0.28
NHLRC1Q6VVB1 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.79■□□□□ 0.28
NHLRC1Q6VVB1 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
NHLRC1Q6VVB1 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.79■□□□□ 0.28
NHLRC1Q6VVB1 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.79■□□□□ 0.28
NHLRC1Q6VVB1 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
NHLRC1Q6VVB1 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
NHLRC1Q6VVB1 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms