Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.36■□□□□ 0.21
HIST1H3AP68431 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIST1H3AP68431 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIST1H3AP68431 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
HIST1H3AP68431 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HIST1H3AP68431 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIST1H3AP68431 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.36■□□□□ 0.21
HIST1H3AP68431 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HIST1H3AP68431 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.36■□□□□ 0.21
HIST1H3AP68431 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.36■□□□□ 0.21
HIST1H3AP68431 TSPY7P-201ENST00000431358 1114 ntBASIC16.36■□□□□ 0.21
HIST1H3AP68431 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIST1H3AP68431 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HIST1H3AP68431 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.36■□□□□ 0.21
HIST1H3AP68431 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.36■□□□□ 0.21
HIST1H3AP68431 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.36■□□□□ 0.21
HIST1H3AP68431 MIR4785-201ENST00000585005 73 ntBASIC16.36■□□□□ 0.21
HIST1H3AP68431 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.36■□□□□ 0.21
HIST1H3AP68431 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIST1H3AP68431 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIST1H3AP68431 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIST1H3AP68431 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIST1H3AP68431 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIST1H3AP68431 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.36■□□□□ 0.21
HIST1H3AP68431 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIST1H3AP68431 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HIST1H3AP68431 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIST1H3AP68431 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HIST1H3AP68431 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIST1H3AP68431 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.35■□□□□ 0.21
HIST1H3AP68431 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HIST1H3AP68431 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIST1H3AP68431 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.35■□□□□ 0.21
HIST1H3AP68431 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIST1H3AP68431 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIST1H3AP68431 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIST1H3AP68431 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HIST1H3AP68431 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.35■□□□□ 0.21
HIST1H3AP68431 GPAT2P1-201ENST00000444924 1672 ntBASIC16.35■□□□□ 0.21
HIST1H3AP68431 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HIST1H3AP68431 UNC93B2-201ENST00000285383 730 ntBASIC16.35■□□□□ 0.21
HIST1H3AP68431 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIST1H3AP68431 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.35■□□□□ 0.21
HIST1H3AP68431 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.35■□□□□ 0.21
HIST1H3AP68431 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIST1H3AP68431 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIST1H3AP68431 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
HIST1H3AP68431 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HIST1H3AP68431 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
HIST1H3AP68431 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.35■□□□□ 0.21
HIST1H3AP68431 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HIST1H3AP68431 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIST1H3AP68431 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.35■□□□□ 0.21
HIST1H3AP68431 AL023803.3-201ENST00000615559 522 ntBASIC16.35■□□□□ 0.21
HIST1H3AP68431 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.35■□□□□ 0.21
HIST1H3AP68431 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
HIST1H3AP68431 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
HIST1H3AP68431 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.35■□□□□ 0.21
HIST1H3AP68431 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.35■□□□□ 0.21
HIST1H3AP68431 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIST1H3AP68431 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.35■□□□□ 0.21
HIST1H3AP68431 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIST1H3AP68431 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIST1H3AP68431 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.35■□□□□ 0.21
HIST1H3AP68431 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIST1H3AP68431 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIST1H3AP68431 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
HIST1H3AP68431 AC008556.1-201ENST00000610908 2040 ntBASIC16.35■□□□□ 0.21
HIST1H3AP68431 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIST1H3AP68431 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
HIST1H3AP68431 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HIST1H3AP68431 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
HIST1H3AP68431 AL499627.1-201ENST00000569373 2188 ntBASIC16.34■□□□□ 0.21
HIST1H3AP68431 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HIST1H3AP68431 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.34■□□□□ 0.21
HIST1H3AP68431 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HIST1H3AP68431 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HIST1H3AP68431 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HIST1H3AP68431 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
HIST1H3AP68431 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HIST1H3AP68431 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
HIST1H3AP68431 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HIST1H3AP68431 MIR564-202ENST00000385049 94 ntBASIC16.34■□□□□ 0.21
HIST1H3AP68431 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.34■□□□□ 0.21
HIST1H3AP68431 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.34■□□□□ 0.21
HIST1H3AP68431 FITM1-202ENST00000559294 800 ntBASIC16.34■□□□□ 0.21
HIST1H3AP68431 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HIST1H3AP68431 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.34■□□□□ 0.21
HIST1H3AP68431 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.34■□□□□ 0.21
HIST1H3AP68431 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.34■□□□□ 0.21
HIST1H3AP68431 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HIST1H3AP68431 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HIST1H3AP68431 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
HIST1H3AP68431 AC079598.2-202ENST00000546624 1451 ntBASIC16.34■□□□□ 0.21
HIST1H3AP68431 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
HIST1H3AP68431 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
HIST1H3AP68431 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HIST1H3AP68431 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.34■□□□□ 0.21
HIST1H3AP68431 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
HIST1H3AP68431 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms