Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.26■□□□□ 0.51
YBX1P67809 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.26■□□□□ 0.51
YBX1P67809 AC133561.5-201ENST00000635547 218 ntBASIC18.26■□□□□ 0.51
YBX1P67809 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
YBX1P67809 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
YBX1P67809 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
YBX1P67809 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
YBX1P67809 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
YBX1P67809 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.26■□□□□ 0.51
YBX1P67809 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
YBX1P67809 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
YBX1P67809 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
YBX1P67809 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.26■□□□□ 0.51
YBX1P67809 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
YBX1P67809 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
YBX1P67809 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
YBX1P67809 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.25■□□□□ 0.51
YBX1P67809 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.25■□□□□ 0.51
YBX1P67809 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
YBX1P67809 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
YBX1P67809 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
YBX1P67809 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
YBX1P67809 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
YBX1P67809 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
YBX1P67809 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
YBX1P67809 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.25■□□□□ 0.51
YBX1P67809 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
YBX1P67809 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.25■□□□□ 0.51
YBX1P67809 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
YBX1P67809 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.25■□□□□ 0.51
YBX1P67809 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
YBX1P67809 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.25■□□□□ 0.51
YBX1P67809 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.25■□□□□ 0.51
YBX1P67809 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.25■□□□□ 0.51
YBX1P67809 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
YBX1P67809 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
YBX1P67809 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
YBX1P67809 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
YBX1P67809 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.25■□□□□ 0.51
YBX1P67809 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
YBX1P67809 PCDHB18P-201ENST00000524813 2368 ntBASIC18.25■□□□□ 0.51
YBX1P67809 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
YBX1P67809 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.25■□□□□ 0.51
YBX1P67809 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
YBX1P67809 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
YBX1P67809 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.24■□□□□ 0.51
YBX1P67809 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
YBX1P67809 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
YBX1P67809 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
YBX1P67809 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
YBX1P67809 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
YBX1P67809 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.24■□□□□ 0.51
YBX1P67809 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
YBX1P67809 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
YBX1P67809 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
YBX1P67809 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
YBX1P67809 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
YBX1P67809 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.24■□□□□ 0.51
YBX1P67809 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
YBX1P67809 NAPSB-206ENST00000562112 1266 ntBASIC18.24■□□□□ 0.51
YBX1P67809 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.24■□□□□ 0.51
YBX1P67809 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
YBX1P67809 AL023803.3-201ENST00000615559 522 ntBASIC18.24■□□□□ 0.51
YBX1P67809 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
YBX1P67809 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
YBX1P67809 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
YBX1P67809 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.24■□□□□ 0.51
YBX1P67809 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
YBX1P67809 Z98044.1-201ENST00000632503 1764 ntBASIC18.24■□□□□ 0.51
YBX1P67809 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
YBX1P67809 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.24■□□□□ 0.51
YBX1P67809 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
YBX1P67809 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
YBX1P67809 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
YBX1P67809 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
YBX1P67809 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
YBX1P67809 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
YBX1P67809 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
YBX1P67809 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
YBX1P67809 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
YBX1P67809 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
YBX1P67809 AL354751.1-201ENST00000412768 1863 ntBASIC18.23■□□□□ 0.51
YBX1P67809 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
YBX1P67809 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.23■□□□□ 0.51
YBX1P67809 ECEL1P3-201ENST00000427961 737 ntBASIC18.23■□□□□ 0.51
YBX1P67809 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.23■□□□□ 0.51
YBX1P67809 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.23■□□□□ 0.51
YBX1P67809 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.23■□□□□ 0.51
YBX1P67809 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
YBX1P67809 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.23■□□□□ 0.51
YBX1P67809 AC012306.2-201ENST00000609350 630 ntBASIC18.23■□□□□ 0.51
YBX1P67809 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.23■□□□□ 0.51
YBX1P67809 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
YBX1P67809 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.23■□□□□ 0.51
YBX1P67809 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
YBX1P67809 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.23■□□□□ 0.51
YBX1P67809 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.23■□□□□ 0.51
YBX1P67809 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
YBX1P67809 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
YBX1P67809 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms