Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AP002982.1-201ENST00000492365 877 ntBASIC18.33■□□□□ 0.52
CDH13P55290 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.33■□□□□ 0.52
CDH13P55290 MIR4651-201ENST00000582622 73 ntBASIC18.33■□□□□ 0.52
CDH13P55290 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.33■□□□□ 0.52
CDH13P55290 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.33■□□□□ 0.52
CDH13P55290 AC068587.9-201ENST00000641814 219 ntBASIC18.33■□□□□ 0.52
CDH13P55290 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CDH13P55290 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDH13P55290 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDH13P55290 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.33■□□□□ 0.52
CDH13P55290 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CDH13P55290 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDH13P55290 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDH13P55290 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDH13P55290 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.33■□□□□ 0.52
CDH13P55290 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CDH13P55290 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.33■□□□□ 0.52
CDH13P55290 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDH13P55290 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CDH13P55290 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
CDH13P55290 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH13P55290 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDH13P55290 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CDH13P55290 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.32■□□□□ 0.52
CDH13P55290 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.32■□□□□ 0.52
CDH13P55290 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.32■□□□□ 0.52
CDH13P55290 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CDH13P55290 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.32■□□□□ 0.52
CDH13P55290 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH13P55290 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.32■□□□□ 0.52
CDH13P55290 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDH13P55290 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.32■□□□□ 0.52
CDH13P55290 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH13P55290 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.32■□□□□ 0.52
CDH13P55290 C1QBPP2-201ENST00000528754 825 ntBASIC18.32■□□□□ 0.52
CDH13P55290 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
CDH13P55290 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CDH13P55290 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.32■□□□□ 0.52
CDH13P55290 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH13P55290 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH13P55290 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
CDH13P55290 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CDH13P55290 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CDH13P55290 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDH13P55290 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.32■□□□□ 0.52
CDH13P55290 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDH13P55290 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH13P55290 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDH13P55290 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH13P55290 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH13P55290 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH13P55290 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDH13P55290 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH13P55290 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH13P55290 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH13P55290 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDH13P55290 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH13P55290 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.31■□□□□ 0.52
CDH13P55290 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.31■□□□□ 0.52
CDH13P55290 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDH13P55290 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDH13P55290 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.31■□□□□ 0.52
CDH13P55290 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH13P55290 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CDH13P55290 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH13P55290 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH13P55290 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH13P55290 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH13P55290 KRT8P32-201ENST00000512863 1461 ntBASIC18.31■□□□□ 0.52
CDH13P55290 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CDH13P55290 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH13P55290 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CDH13P55290 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDH13P55290 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.31■□□□□ 0.52
CDH13P55290 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.3■□□□□ 0.52
CDH13P55290 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH13P55290 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CDH13P55290 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH13P55290 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH13P55290 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH13P55290 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
CDH13P55290 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.3■□□□□ 0.52
CDH13P55290 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH13P55290 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH13P55290 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDH13P55290 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CDH13P55290 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH13P55290 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH13P55290 KSR1P1-201ENST00000446298 240 ntBASIC18.3■□□□□ 0.52
CDH13P55290 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.3■□□□□ 0.52
CDH13P55290 PRSS44-201ENST00000515154 1146 ntBASIC18.3■□□□□ 0.52
CDH13P55290 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CDH13P55290 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.3■□□□□ 0.52
CDH13P55290 AL353708.3-201ENST00000610272 989 ntBASIC18.3■□□□□ 0.52
CDH13P55290 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH13P55290 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH13P55290 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CDH13P55290 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH13P55290 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CDH13P55290 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms