Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
NUBP1P53384 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NUBP1P53384 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.62■□□□□ 0.57
NUBP1P53384 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
NUBP1P53384 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.62■□□□□ 0.57
NUBP1P53384 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NUBP1P53384 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
NUBP1P53384 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NUBP1P53384 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
NUBP1P53384 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.62■□□□□ 0.57
NUBP1P53384 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC18.62■□□□□ 0.57
NUBP1P53384 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.62■□□□□ 0.57
NUBP1P53384 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
NUBP1P53384 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
NUBP1P53384 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NUBP1P53384 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.62■□□□□ 0.57
NUBP1P53384 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.62■□□□□ 0.57
NUBP1P53384 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.62■□□□□ 0.57
NUBP1P53384 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NUBP1P53384 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NUBP1P53384 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.62■□□□□ 0.57
NUBP1P53384 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.62■□□□□ 0.57
NUBP1P53384 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.62■□□□□ 0.57
NUBP1P53384 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
NUBP1P53384 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NUBP1P53384 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NUBP1P53384 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NUBP1P53384 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
NUBP1P53384 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.61■□□□□ 0.57
NUBP1P53384 AC009237.14-201ENST00000609975 1594 ntBASIC18.61■□□□□ 0.57
NUBP1P53384 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NUBP1P53384 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NUBP1P53384 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NUBP1P53384 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NUBP1P53384 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.61■□□□□ 0.57
NUBP1P53384 METTL21AP1-201ENST00000438852 635 ntBASIC18.61■□□□□ 0.57
NUBP1P53384 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NUBP1P53384 AL132657.2-201ENST00000564417 358 ntBASIC18.61■□□□□ 0.57
NUBP1P53384 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.61■□□□□ 0.57
NUBP1P53384 AL451064.1-201ENST00000607718 471 ntBASIC18.61■□□□□ 0.57
NUBP1P53384 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.61■□□□□ 0.57
NUBP1P53384 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
NUBP1P53384 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.6■□□□□ 0.57
NUBP1P53384 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
NUBP1P53384 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NUBP1P53384 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NUBP1P53384 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.6■□□□□ 0.57
NUBP1P53384 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
NUBP1P53384 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NUBP1P53384 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.6■□□□□ 0.57
NUBP1P53384 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NUBP1P53384 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.6■□□□□ 0.57
NUBP1P53384 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.6■□□□□ 0.57
NUBP1P53384 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.6■□□□□ 0.57
NUBP1P53384 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NUBP1P53384 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
NUBP1P53384 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.6■□□□□ 0.57
NUBP1P53384 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.6■□□□□ 0.57
NUBP1P53384 AP001269.4-201ENST00000609611 512 ntBASIC18.6■□□□□ 0.57
NUBP1P53384 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC18.6■□□□□ 0.57
NUBP1P53384 AC073575.2-201ENST00000614212 627 ntBASIC18.6■□□□□ 0.57
NUBP1P53384 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
NUBP1P53384 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.6■□□□□ 0.57
NUBP1P53384 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
NUBP1P53384 AC104417.2-201ENST00000562989 1793 ntBASIC18.6■□□□□ 0.57
NUBP1P53384 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NUBP1P53384 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.6■□□□□ 0.57
NUBP1P53384 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
NUBP1P53384 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.6■□□□□ 0.57
NUBP1P53384 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NUBP1P53384 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
NUBP1P53384 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.59■□□□□ 0.57
NUBP1P53384 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NUBP1P53384 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NUBP1P53384 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
NUBP1P53384 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NUBP1P53384 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.59■□□□□ 0.57
NUBP1P53384 HLA-J-203ENST00000494367 1087 ntBASIC18.59■□□□□ 0.57
NUBP1P53384 RNA5SP415-201ENST00000517246 115 ntBASIC18.59■□□□□ 0.57
NUBP1P53384 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.59■□□□□ 0.57
NUBP1P53384 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.59■□□□□ 0.57
NUBP1P53384 AL365223.1-201ENST00000574864 1297 ntBASIC18.59■□□□□ 0.57
NUBP1P53384 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.59■□□□□ 0.57
NUBP1P53384 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NUBP1P53384 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.59■□□□□ 0.57
NUBP1P53384 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NUBP1P53384 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
NUBP1P53384 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.59■□□□□ 0.57
NUBP1P53384 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.59■□□□□ 0.57
NUBP1P53384 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.59■□□□□ 0.57
NUBP1P53384 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.59■□□□□ 0.57
NUBP1P53384 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
NUBP1P53384 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NUBP1P53384 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
NUBP1P53384 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
NUBP1P53384 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.58■□□□□ 0.57
NUBP1P53384 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.58■□□□□ 0.57
NUBP1P53384 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
NUBP1P53384 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NUBP1P53384 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms