Protein–RNA interactions for Protein: P49674

CSNK1E, Casein kinase I isoform epsilon, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1EP49674 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.33■□□□□ 0.52
CSNK1EP49674 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.33■□□□□ 0.52
CSNK1EP49674 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.33■□□□□ 0.52
CSNK1EP49674 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.33■□□□□ 0.52
CSNK1EP49674 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
CSNK1EP49674 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.33■□□□□ 0.52
CSNK1EP49674 AC104692.2-201ENST00000603054 253 ntBASIC18.33■□□□□ 0.52
CSNK1EP49674 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSNK1EP49674 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.33■□□□□ 0.52
CSNK1EP49674 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CSNK1EP49674 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CSNK1EP49674 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSNK1EP49674 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.33■□□□□ 0.52
CSNK1EP49674 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSNK1EP49674 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSNK1EP49674 KRT8P32-201ENST00000512863 1461 ntBASIC18.33■□□□□ 0.52
CSNK1EP49674 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.33■□□□□ 0.52
CSNK1EP49674 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1EP49674 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1EP49674 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1EP49674 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1EP49674 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.32■□□□□ 0.52
CSNK1EP49674 AC006333.2-201ENST00000607957 2099 ntBASIC18.32■□□□□ 0.52
CSNK1EP49674 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1EP49674 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.32■□□□□ 0.52
CSNK1EP49674 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
CSNK1EP49674 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1EP49674 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1EP49674 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.32■□□□□ 0.52
CSNK1EP49674 AL160237.2-201ENST00000556165 472 ntBASIC18.32■□□□□ 0.52
CSNK1EP49674 AC074051.2-201ENST00000565115 352 ntBASIC18.32■□□□□ 0.52
CSNK1EP49674 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
CSNK1EP49674 AC138894.3-201ENST00000603787 634 ntBASIC18.32■□□□□ 0.52
CSNK1EP49674 AL390719.2-201ENST00000606993 987 ntBASIC18.32■□□□□ 0.52
CSNK1EP49674 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.32■□□□□ 0.52
CSNK1EP49674 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.32■□□□□ 0.52
CSNK1EP49674 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CSNK1EP49674 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.32■□□□□ 0.52
CSNK1EP49674 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.32■□□□□ 0.52
CSNK1EP49674 LINC00167-201ENST00000530583 1419 ntBASIC18.32■□□□□ 0.52
CSNK1EP49674 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1EP49674 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CSNK1EP49674 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.31■□□□□ 0.52
CSNK1EP49674 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.31■□□□□ 0.52
CSNK1EP49674 AC034236.2-201ENST00000606662 1610 ntBASIC18.31■□□□□ 0.52
CSNK1EP49674 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1EP49674 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1EP49674 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1EP49674 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1EP49674 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.31■□□□□ 0.52
CSNK1EP49674 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CSNK1EP49674 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1EP49674 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.31■□□□□ 0.52
CSNK1EP49674 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.31■□□□□ 0.52
CSNK1EP49674 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.31■□□□□ 0.52
CSNK1EP49674 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1EP49674 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.31■□□□□ 0.52
CSNK1EP49674 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CSNK1EP49674 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1EP49674 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1EP49674 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.31■□□□□ 0.52
CSNK1EP49674 AC125437.2-201ENST00000625180 2167 ntBASIC18.31■□□□□ 0.52
CSNK1EP49674 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1EP49674 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CSNK1EP49674 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1EP49674 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.31■□□□□ 0.52
CSNK1EP49674 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CSNK1EP49674 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.31■□□□□ 0.52
CSNK1EP49674 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CSNK1EP49674 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.31■□□□□ 0.52
CSNK1EP49674 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.31■□□□□ 0.52
CSNK1EP49674 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1EP49674 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CSNK1EP49674 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CSNK1EP49674 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSNK1EP49674 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CSNK1EP49674 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.3■□□□□ 0.52
CSNK1EP49674 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSNK1EP49674 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CSNK1EP49674 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.3■□□□□ 0.52
CSNK1EP49674 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.3■□□□□ 0.52
CSNK1EP49674 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CSNK1EP49674 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CSNK1EP49674 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSNK1EP49674 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CSNK1EP49674 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSNK1EP49674 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CSNK1EP49674 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSNK1EP49674 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CSNK1EP49674 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.3■□□□□ 0.52
CSNK1EP49674 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CSNK1EP49674 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.3■□□□□ 0.52
CSNK1EP49674 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CSNK1EP49674 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CSNK1EP49674 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.3■□□□□ 0.52
CSNK1EP49674 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.3■□□□□ 0.52
CSNK1EP49674 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.3■□□□□ 0.52
CSNK1EP49674 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.3■□□□□ 0.52
CSNK1EP49674 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSNK1EP49674 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms