Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
PCP4P48539 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
PCP4P48539 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
PCP4P48539 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC12.92□□□□□ -0.34
PCP4P48539 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PCP4P48539 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PCP4P48539 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC12.92□□□□□ -0.34
PCP4P48539 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
PCP4P48539 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
PCP4P48539 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PCP4P48539 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PCP4P48539 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PCP4P48539 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
PCP4P48539 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PCP4P48539 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC12.92□□□□□ -0.34
PCP4P48539 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PCP4P48539 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
PCP4P48539 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
PCP4P48539 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PCP4P48539 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PCP4P48539 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PCP4P48539 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PCP4P48539 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PCP4P48539 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PCP4P48539 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC12.92□□□□□ -0.34
PCP4P48539 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PCP4P48539 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC12.92□□□□□ -0.34
PCP4P48539 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PCP4P48539 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PCP4P48539 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
PCP4P48539 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
PCP4P48539 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
PCP4P48539 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
PCP4P48539 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PCP4P48539 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
PCP4P48539 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC12.92□□□□□ -0.34
PCP4P48539 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC12.92□□□□□ -0.34
PCP4P48539 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PCP4P48539 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
PCP4P48539 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.91□□□□□ -0.34
PCP4P48539 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PCP4P48539 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PCP4P48539 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC12.91□□□□□ -0.34
PCP4P48539 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC12.91□□□□□ -0.34
PCP4P48539 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC12.91□□□□□ -0.34
PCP4P48539 SLC9A7P1-201ENST00000554295 3311 ntBASIC12.91□□□□□ -0.34
PCP4P48539 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
PCP4P48539 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC12.91□□□□□ -0.34
PCP4P48539 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
PCP4P48539 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PCP4P48539 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PCP4P48539 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
PCP4P48539 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
PCP4P48539 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC12.91□□□□□ -0.34
PCP4P48539 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC12.91□□□□□ -0.34
PCP4P48539 AC126335.2-201ENST00000623362 4637 ntBASIC12.91□□□□□ -0.34
PCP4P48539 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
PCP4P48539 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PCP4P48539 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
PCP4P48539 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PCP4P48539 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PCP4P48539 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PCP4P48539 AL391807.1-203ENST00000604392 2365 ntBASIC12.91□□□□□ -0.34
PCP4P48539 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PCP4P48539 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PCP4P48539 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PCP4P48539 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
PCP4P48539 AC087386.2-201ENST00000623212 4637 ntBASIC12.9□□□□□ -0.34
PCP4P48539 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC12.9□□□□□ -0.34
PCP4P48539 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC12.9□□□□□ -0.34
PCP4P48539 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PCP4P48539 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PCP4P48539 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PCP4P48539 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
PCP4P48539 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PCP4P48539 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC12.9□□□□□ -0.34
PCP4P48539 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PCP4P48539 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
PCP4P48539 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PCP4P48539 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC12.9□□□□□ -0.34
PCP4P48539 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PCP4P48539 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
PCP4P48539 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
PCP4P48539 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PCP4P48539 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
PCP4P48539 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
PCP4P48539 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PCP4P48539 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
PCP4P48539 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PCP4P48539 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PCP4P48539 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PCP4P48539 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PCP4P48539 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PCP4P48539 AL603756.1-201ENST00000606511 2163 ntBASIC12.9□□□□□ -0.34
PCP4P48539 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
PCP4P48539 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
PCP4P48539 PCDHA14-201ENST00000506751 2298 ntBASIC12.9□□□□□ -0.35
PCP4P48539 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC12.9□□□□□ -0.35
PCP4P48539 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
PCP4P48539 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms