Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
COL4A5P29400 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
COL4A5P29400 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
COL4A5P29400 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC22.46■■□□□ 1.19
COL4A5P29400 HES2-202ENST00000377836 507 ntTSL 2 BASIC22.46■■□□□ 1.19
COL4A5P29400 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
COL4A5P29400 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
COL4A5P29400 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC22.46■■□□□ 1.19
COL4A5P29400 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
COL4A5P29400 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC22.46■■□□□ 1.19
COL4A5P29400 AC139887.3-201ENST00000568585 713 ntBASIC22.46■■□□□ 1.19
COL4A5P29400 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC22.46■■□□□ 1.19
COL4A5P29400 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
COL4A5P29400 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC22.45■■□□□ 1.19
COL4A5P29400 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
COL4A5P29400 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC22.45■■□□□ 1.18
COL4A5P29400 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
COL4A5P29400 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
COL4A5P29400 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
COL4A5P29400 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC22.45■■□□□ 1.18
COL4A5P29400 PIN1-206ENST00000587625 878 ntTSL 2 BASIC22.45■■□□□ 1.18
COL4A5P29400 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
COL4A5P29400 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
COL4A5P29400 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC22.45■■□□□ 1.18
COL4A5P29400 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
COL4A5P29400 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
COL4A5P29400 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
COL4A5P29400 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC22.44■■□□□ 1.18
COL4A5P29400 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
COL4A5P29400 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
COL4A5P29400 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC22.44■■□□□ 1.18
COL4A5P29400 LINC01521-201ENST00000504184 1943 ntBASIC22.44■■□□□ 1.18
COL4A5P29400 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
COL4A5P29400 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC22.44■■□□□ 1.18
COL4A5P29400 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC22.44■■□□□ 1.18
COL4A5P29400 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC22.44■■□□□ 1.18
COL4A5P29400 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
COL4A5P29400 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC22.44■■□□□ 1.18
COL4A5P29400 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC22.44■■□□□ 1.18
COL4A5P29400 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC22.44■■□□□ 1.18
COL4A5P29400 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC22.44■■□□□ 1.18
COL4A5P29400 AL357033.4-201ENST00000617703 1807 ntBASIC22.44■■□□□ 1.18
COL4A5P29400 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC22.44■■□□□ 1.18
COL4A5P29400 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
COL4A5P29400 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
COL4A5P29400 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
COL4A5P29400 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
COL4A5P29400 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
COL4A5P29400 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
COL4A5P29400 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
COL4A5P29400 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC22.43■■□□□ 1.18
COL4A5P29400 HMGN1P19-201ENST00000436976 333 ntBASIC22.43■■□□□ 1.18
COL4A5P29400 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC22.43■■□□□ 1.18
COL4A5P29400 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC22.43■■□□□ 1.18
COL4A5P29400 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC22.43■■□□□ 1.18
COL4A5P29400 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC22.43■■□□□ 1.18
COL4A5P29400 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
COL4A5P29400 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC22.43■■□□□ 1.18
COL4A5P29400 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
COL4A5P29400 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC22.43■■□□□ 1.18
COL4A5P29400 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
COL4A5P29400 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC22.42■■□□□ 1.18
COL4A5P29400 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC22.42■■□□□ 1.18
COL4A5P29400 RPL13AP23-201ENST00000480739 586 ntBASIC22.42■■□□□ 1.18
COL4A5P29400 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC22.42■■□□□ 1.18
COL4A5P29400 MIR5100-201ENST00000579544 119 ntBASIC22.42■■□□□ 1.18
COL4A5P29400 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
COL4A5P29400 FAM215A-202ENST00000632077 792 ntBASIC22.42■■□□□ 1.18
COL4A5P29400 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
COL4A5P29400 KRT8P50-201ENST00000562022 1438 ntBASIC22.42■■□□□ 1.18
COL4A5P29400 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
COL4A5P29400 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
COL4A5P29400 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
COL4A5P29400 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
COL4A5P29400 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
COL4A5P29400 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
COL4A5P29400 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC22.42■■□□□ 1.18
COL4A5P29400 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
COL4A5P29400 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
COL4A5P29400 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC22.42■■□□□ 1.18
COL4A5P29400 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC22.42■■□□□ 1.18
COL4A5P29400 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC22.42■■□□□ 1.18
COL4A5P29400 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
COL4A5P29400 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC22.42■■□□□ 1.18
COL4A5P29400 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
COL4A5P29400 TERC-201ENST00000602385 541 ntBASIC22.42■■□□□ 1.18
COL4A5P29400 AL591684.3-201ENST00000605187 298 ntBASIC22.42■■□□□ 1.18
COL4A5P29400 AC055717.3-201ENST00000622967 595 ntBASIC22.42■■□□□ 1.18
COL4A5P29400 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC22.41■■□□□ 1.18
COL4A5P29400 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
COL4A5P29400 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
COL4A5P29400 PMS2P7-201ENST00000506558 1336 ntBASIC22.41■■□□□ 1.18
COL4A5P29400 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
COL4A5P29400 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
COL4A5P29400 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
COL4A5P29400 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
COL4A5P29400 FAM220CP-201ENST00000395253 831 ntBASIC22.41■■□□□ 1.18
COL4A5P29400 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
COL4A5P29400 POM121L3P-201ENST00000419331 1163 ntBASIC22.41■■□□□ 1.18
COL4A5P29400 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms