Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC14.33□□□□□ -0.12
RAB4AP20338 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
RAB4AP20338 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB4AP20338 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC14.33□□□□□ -0.12
RAB4AP20338 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAB4AP20338 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB4AP20338 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB4AP20338 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAB4AP20338 AC010141.2-201ENST00000452426 721 ntBASIC14.33□□□□□ -0.12
RAB4AP20338 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC14.33□□□□□ -0.12
RAB4AP20338 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAB4AP20338 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB4AP20338 SLC7A5P2-201ENST00000553010 536 ntBASIC14.33□□□□□ -0.12
RAB4AP20338 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAB4AP20338 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAB4AP20338 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB4AP20338 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAB4AP20338 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB4AP20338 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB4AP20338 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB4AP20338 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB4AP20338 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAB4AP20338 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB4AP20338 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB4AP20338 CD276-203ENST00000537340 2439 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB4AP20338 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.33□□□□□ -0.12
RAB4AP20338 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB4AP20338 AC135776.1-201ENST00000319817 2481 ntBASIC14.33□□□□□ -0.12
RAB4AP20338 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB4AP20338 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB4AP20338 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB4AP20338 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
RAB4AP20338 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC14.32□□□□□ -0.12
RAB4AP20338 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAB4AP20338 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB4AP20338 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC14.32□□□□□ -0.12
RAB4AP20338 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAB4AP20338 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAB4AP20338 Z98044.1-201ENST00000632503 1764 ntBASIC14.32□□□□□ -0.12
RAB4AP20338 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
RAB4AP20338 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB4AP20338 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC14.32□□□□□ -0.12
RAB4AP20338 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB4AP20338 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAB4AP20338 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.32□□□□□ -0.12
RAB4AP20338 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC14.32□□□□□ -0.12
RAB4AP20338 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
RAB4AP20338 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB4AP20338 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB4AP20338 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC14.32□□□□□ -0.12
RAB4AP20338 AL356441.2-201ENST00000443009 864 ntBASIC14.32□□□□□ -0.12
RAB4AP20338 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC14.32□□□□□ -0.12
RAB4AP20338 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC14.32□□□□□ -0.12
RAB4AP20338 AC027682.1-201ENST00000562846 899 ntBASIC14.32□□□□□ -0.12
RAB4AP20338 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC14.32□□□□□ -0.12
RAB4AP20338 AL355001.2-201ENST00000620617 1191 ntBASIC14.32□□□□□ -0.12
RAB4AP20338 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC14.32□□□□□ -0.12
RAB4AP20338 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAB4AP20338 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB4AP20338 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
RAB4AP20338 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB4AP20338 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB4AP20338 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC14.32□□□□□ -0.12
RAB4AP20338 AC135279.3-201ENST00000610945 1311 ntBASIC14.32□□□□□ -0.12
RAB4AP20338 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB4AP20338 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.32□□□□□ -0.12
RAB4AP20338 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC14.32□□□□□ -0.12
RAB4AP20338 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB4AP20338 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB4AP20338 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB4AP20338 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC14.32□□□□□ -0.12
RAB4AP20338 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB4AP20338 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
RAB4AP20338 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAB4AP20338 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAB4AP20338 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB4AP20338 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB4AP20338 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB4AP20338 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
RAB4AP20338 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB4AP20338 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB4AP20338 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB4AP20338 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB4AP20338 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.31□□□□□ -0.12
RAB4AP20338 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
RAB4AP20338 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB4AP20338 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
RAB4AP20338 AP001271.2-201ENST00000624018 1556 ntBASIC14.31□□□□□ -0.12
RAB4AP20338 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB4AP20338 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
RAB4AP20338 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB4AP20338 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB4AP20338 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB4AP20338 SAPCD2P1-201ENST00000395413 1184 ntBASIC14.31□□□□□ -0.12
RAB4AP20338 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB4AP20338 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB4AP20338 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC14.31□□□□□ -0.12
RAB4AP20338 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB4AP20338 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB4AP20338 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms