Protein–RNA interactions for Protein: P17980

PSMC3, 26S proteasome regulatory subunit 6A, humanhuman

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3P17980 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PSMC3P17980 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.5■□□□□ 0.71
PSMC3P17980 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
PSMC3P17980 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.5■□□□□ 0.71
PSMC3P17980 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PSMC3P17980 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PSMC3P17980 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PSMC3P17980 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PSMC3P17980 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PSMC3P17980 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.5■□□□□ 0.71
PSMC3P17980 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.5■□□□□ 0.71
PSMC3P17980 MIR3652-201ENST00000579335 131 ntBASIC19.5■□□□□ 0.71
PSMC3P17980 AC011498.5-201ENST00000592027 486 ntBASIC19.5■□□□□ 0.71
PSMC3P17980 AC092329.2-201ENST00000598402 547 ntBASIC19.5■□□□□ 0.71
PSMC3P17980 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PSMC3P17980 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PSMC3P17980 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PSMC3P17980 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PSMC3P17980 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PSMC3P17980 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PSMC3P17980 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.49■□□□□ 0.71
PSMC3P17980 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PSMC3P17980 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PSMC3P17980 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.49■□□□□ 0.71
PSMC3P17980 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PSMC3P17980 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PSMC3P17980 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PSMC3P17980 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PSMC3P17980 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PSMC3P17980 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.49■□□□□ 0.71
PSMC3P17980 BX276092.5-203ENST00000456199 560 ntBASIC19.49■□□□□ 0.71
PSMC3P17980 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.49■□□□□ 0.71
PSMC3P17980 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PSMC3P17980 AL121672.3-201ENST00000608644 468 ntBASIC19.49■□□□□ 0.71
PSMC3P17980 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.49■□□□□ 0.71
PSMC3P17980 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
PSMC3P17980 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PSMC3P17980 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PSMC3P17980 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PSMC3P17980 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PSMC3P17980 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PSMC3P17980 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
PSMC3P17980 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.49■□□□□ 0.71
PSMC3P17980 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PSMC3P17980 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.49■□□□□ 0.71
PSMC3P17980 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PSMC3P17980 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PSMC3P17980 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PSMC3P17980 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PSMC3P17980 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PSMC3P17980 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PSMC3P17980 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PSMC3P17980 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PSMC3P17980 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
PSMC3P17980 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PSMC3P17980 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
PSMC3P17980 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.48■□□□□ 0.71
PSMC3P17980 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.48■□□□□ 0.71
PSMC3P17980 MCCD1P1-208ENST00000445732 328 ntBASIC19.48■□□□□ 0.71
PSMC3P17980 TSSC2-201ENST00000450217 709 ntBASIC19.48■□□□□ 0.71
PSMC3P17980 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.48■□□□□ 0.71
PSMC3P17980 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.48■□□□□ 0.71
PSMC3P17980 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.48■□□□□ 0.71
PSMC3P17980 MIR3180-5-201ENST00000583743 153 ntBASIC19.48■□□□□ 0.71
PSMC3P17980 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.48■□□□□ 0.71
PSMC3P17980 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PSMC3P17980 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PSMC3P17980 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PSMC3P17980 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PSMC3P17980 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PSMC3P17980 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PSMC3P17980 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
PSMC3P17980 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PSMC3P17980 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
PSMC3P17980 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PSMC3P17980 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PSMC3P17980 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PSMC3P17980 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.47■□□□□ 0.71
PSMC3P17980 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.47■□□□□ 0.71
PSMC3P17980 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.47■□□□□ 0.71
PSMC3P17980 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PSMC3P17980 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.47■□□□□ 0.71
PSMC3P17980 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.47■□□□□ 0.71
PSMC3P17980 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PSMC3P17980 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PSMC3P17980 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.47■□□□□ 0.71
PSMC3P17980 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.47■□□□□ 0.71
PSMC3P17980 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PSMC3P17980 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PSMC3P17980 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PSMC3P17980 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PSMC3P17980 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PSMC3P17980 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PSMC3P17980 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PSMC3P17980 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PSMC3P17980 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PSMC3P17980 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PSMC3P17980 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PSMC3P17980 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PSMC3P17980 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms