Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
UBL4AP11441 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBL4AP11441 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBL4AP11441 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.32■□□□□ 0.36
UBL4AP11441 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBL4AP11441 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
UBL4AP11441 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBL4AP11441 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBL4AP11441 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.31■□□□□ 0.36
UBL4AP11441 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.31■□□□□ 0.36
UBL4AP11441 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
UBL4AP11441 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBL4AP11441 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
UBL4AP11441 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBL4AP11441 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.31■□□□□ 0.36
UBL4AP11441 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
UBL4AP11441 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UBL4AP11441 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBL4AP11441 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBL4AP11441 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UBL4AP11441 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBL4AP11441 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.31■□□□□ 0.36
UBL4AP11441 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UBL4AP11441 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UBL4AP11441 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
UBL4AP11441 SNORA78-201ENST00000459373 127 ntBASIC17.31■□□□□ 0.36
UBL4AP11441 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.31■□□□□ 0.36
UBL4AP11441 AC097488.1-201ENST00000507834 756 ntBASIC17.31■□□□□ 0.36
UBL4AP11441 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.31■□□□□ 0.36
UBL4AP11441 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.31■□□□□ 0.36
UBL4AP11441 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.31■□□□□ 0.36
UBL4AP11441 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.31■□□□□ 0.36
UBL4AP11441 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.31■□□□□ 0.36
UBL4AP11441 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.31■□□□□ 0.36
UBL4AP11441 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBL4AP11441 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.31■□□□□ 0.36
UBL4AP11441 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBL4AP11441 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
UBL4AP11441 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
UBL4AP11441 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.31■□□□□ 0.36
UBL4AP11441 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.3■□□□□ 0.36
UBL4AP11441 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBL4AP11441 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBL4AP11441 KRT8P3-201ENST00000519669 1449 ntBASIC17.3■□□□□ 0.36
UBL4AP11441 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.3■□□□□ 0.36
UBL4AP11441 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
UBL4AP11441 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.3■□□□□ 0.36
UBL4AP11441 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
UBL4AP11441 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
UBL4AP11441 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.3■□□□□ 0.36
UBL4AP11441 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBL4AP11441 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBL4AP11441 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.3■□□□□ 0.36
UBL4AP11441 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.3■□□□□ 0.36
UBL4AP11441 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBL4AP11441 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
UBL4AP11441 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBL4AP11441 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBL4AP11441 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.3■□□□□ 0.36
UBL4AP11441 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
UBL4AP11441 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.3■□□□□ 0.36
UBL4AP11441 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.3■□□□□ 0.36
UBL4AP11441 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBL4AP11441 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.3■□□□□ 0.36
UBL4AP11441 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBL4AP11441 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.3■□□□□ 0.36
UBL4AP11441 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.3■□□□□ 0.36
UBL4AP11441 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBL4AP11441 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
UBL4AP11441 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBL4AP11441 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBL4AP11441 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
UBL4AP11441 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
UBL4AP11441 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
UBL4AP11441 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
UBL4AP11441 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
UBL4AP11441 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBL4AP11441 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBL4AP11441 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
UBL4AP11441 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
UBL4AP11441 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.29■□□□□ 0.36
UBL4AP11441 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.29■□□□□ 0.36
UBL4AP11441 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBL4AP11441 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
UBL4AP11441 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBL4AP11441 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBL4AP11441 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBL4AP11441 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
UBL4AP11441 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
UBL4AP11441 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.29■□□□□ 0.36
UBL4AP11441 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
UBL4AP11441 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBL4AP11441 CRYGFP-201ENST00000418459 633 ntBASIC17.29■□□□□ 0.36
UBL4AP11441 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.29■□□□□ 0.36
UBL4AP11441 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
UBL4AP11441 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.29■□□□□ 0.36
UBL4AP11441 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
UBL4AP11441 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBL4AP11441 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.29■□□□□ 0.36
UBL4AP11441 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms