Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MMP3P08254 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MMP3P08254 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MMP3P08254 AC004870.1-201ENST00000315132 882 ntBASIC20.72■□□□□ 0.91
MMP3P08254 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
MMP3P08254 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
MMP3P08254 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.72■□□□□ 0.91
MMP3P08254 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.72■□□□□ 0.91
MMP3P08254 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.72■□□□□ 0.91
MMP3P08254 IFNL4P1-201ENST00000607083 540 ntBASIC20.72■□□□□ 0.91
MMP3P08254 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
MMP3P08254 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
MMP3P08254 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
MMP3P08254 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
MMP3P08254 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.72■□□□□ 0.91
MMP3P08254 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.72■□□□□ 0.91
MMP3P08254 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
MMP3P08254 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MMP3P08254 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MMP3P08254 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MMP3P08254 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MMP3P08254 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.71■□□□□ 0.91
MMP3P08254 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MMP3P08254 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.71■□□□□ 0.91
MMP3P08254 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
MMP3P08254 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MMP3P08254 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
MMP3P08254 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MMP3P08254 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MMP3P08254 TSPY19P-201ENST00000418461 509 ntBASIC20.71■□□□□ 0.91
MMP3P08254 TSPY18P-201ENST00000441642 509 ntBASIC20.71■□□□□ 0.91
MMP3P08254 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.71■□□□□ 0.91
MMP3P08254 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.71■□□□□ 0.91
MMP3P08254 AC090616.6-201ENST00000582640 721 ntBASIC20.71■□□□□ 0.91
MMP3P08254 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.71■□□□□ 0.91
MMP3P08254 GPR32P1-201ENST00000601788 811 ntBASIC20.71■□□□□ 0.91
MMP3P08254 AL732292.2-201ENST00000609649 430 ntBASIC20.71■□□□□ 0.91
MMP3P08254 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.71■□□□□ 0.91
MMP3P08254 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.71■□□□□ 0.91
MMP3P08254 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
MMP3P08254 Z98044.1-201ENST00000632503 1764 ntBASIC20.71■□□□□ 0.91
MMP3P08254 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.71■□□□□ 0.91
MMP3P08254 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MMP3P08254 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MMP3P08254 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MMP3P08254 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.71■□□□□ 0.91
MMP3P08254 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
MMP3P08254 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MMP3P08254 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MMP3P08254 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MMP3P08254 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
MMP3P08254 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MMP3P08254 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.7■□□□□ 0.9
MMP3P08254 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.7■□□□□ 0.9
MMP3P08254 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.7■□□□□ 0.9
MMP3P08254 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.7■□□□□ 0.9
MMP3P08254 AC012615.1-201ENST00000565797 1299 ntBASIC20.7■□□□□ 0.9
MMP3P08254 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.7■□□□□ 0.9
MMP3P08254 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.7■□□□□ 0.9
MMP3P08254 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
MMP3P08254 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.7■□□□□ 0.9
MMP3P08254 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MMP3P08254 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
MMP3P08254 AL032819.2-201ENST00000624543 2162 ntBASIC20.7■□□□□ 0.9
MMP3P08254 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MMP3P08254 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MMP3P08254 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.7■□□□□ 0.9
MMP3P08254 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
MMP3P08254 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
MMP3P08254 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MMP3P08254 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
MMP3P08254 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MMP3P08254 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.69■□□□□ 0.9
MMP3P08254 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
MMP3P08254 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MMP3P08254 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.69■□□□□ 0.9
MMP3P08254 IGHGP-201ENST00000390555 1178 ntBASIC20.69■□□□□ 0.9
MMP3P08254 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.69■□□□□ 0.9
MMP3P08254 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.69■□□□□ 0.9
MMP3P08254 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.69■□□□□ 0.9
MMP3P08254 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.69■□□□□ 0.9
MMP3P08254 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
MMP3P08254 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.69■□□□□ 0.9
MMP3P08254 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MMP3P08254 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
MMP3P08254 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.69■□□□□ 0.9
MMP3P08254 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MMP3P08254 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
MMP3P08254 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
MMP3P08254 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MMP3P08254 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.68■□□□□ 0.9
MMP3P08254 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MMP3P08254 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MMP3P08254 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MMP3P08254 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MMP3P08254 HEIH-201ENST00000623091 1652 ntBASIC20.68■□□□□ 0.9
MMP3P08254 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.68■□□□□ 0.9
MMP3P08254 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MMP3P08254 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.68■□□□□ 0.9
MMP3P08254 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms